RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 DGKHQ86XP1 1220 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ENAHQ8N8S7 591 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 BRI3BPQ8WY22 251 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 MKL1Q969V6 931 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 EMILIN3Q9NT22 766 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 LOC285556D6RIA3 1793 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 WTAPQ15007 396 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 DNAJC5GQ8N7S2 189 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 MTMR7Q9Y216 660 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 THSD7BQ9C0I4 1608 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TESPA1A2RU30 521 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 CPA1P15085 419 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TM4SF4P48230 202 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 NOVP48745 357 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 COL9A3Q14050 684 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 OTUD7BQ6GQQ9 843 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 RCSD1Q6JBY9 416 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 IFNL1Q8IU54 200 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TMEM87BQ96K49 555 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 C12orf42Q96LP6 360 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
TNFRSF1A-216ENST00000543995 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 F5H6K3 240 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 VCAM1P19320 739 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 FGD1P98174 961 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 KLRC3Q07444 240 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 MOGSQ13724 837 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SEC23AQ15436 765 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 LPAR1Q92633 364 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 PTPN18Q99952 460 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
TNFRSF1A-216ENST00000543995 WDR19Q8NEZ3 1342 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 EXOSC10Q01780 885 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 PABPC4Q13310 644 aaKnown RBP eCLIP16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 KIAA1755Q5JYT7 1200 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 NFXL1Q6ZNB6 911 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 GMCL1P1Q8NEA9 526 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 IGDCC4Q8TDY8 1250 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ANKS1AQ92625 1134 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 MTA3Q9BTC8 594 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TM6SF1Q9BZW5 370 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
TNFRSF1A-216ENST00000543995 PDHXO00330 501 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 IGF2BP3O00425 579 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■□□ 18.3
TNFRSF1A-216ENST00000543995 SH2B2O14492 632 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 NDUFB10O96000 172 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 GPAT2Q6NUI2 795 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 FAM43AQ8N2R8 423 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 PNMA1Q8ND90 353 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 UPF3BQ9BZI7 483 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 RPAP3Q9H6T3 665 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
TNFRSF1A-216ENST00000543995 CCDC69A6NI79 296 aa16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 WDR46O15213 610 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SLC1A4P43007 532 aa16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 RBM25P49756 843 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 MAP2K1Q02750 393 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 FAM83BQ5T0W9 1011 aa16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ALDH1A1P00352 501 aa16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 OSBPP22059 807 aa16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 Q6ZUG5 572 aa16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 NUP88Q99567 741 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 PNMA3Q9UL41 463 aa16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L15C9J2P7 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L13C9JLJ4 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L11C9JVI0 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L18D6R9N7 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L22D6RA61 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L17D6RBQ6 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L19D6RCP7 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L20D6RJB6 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 HOXA7P31268 230 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 LIFRP42702 1097 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 USP17L24Q0WX57 530 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TAF1CQ15572 869 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CCDC96Q2M329 555 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms