RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 IFNL1Q8IU54 200 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
SP140-213ENST00000543928 PROCA1Q8NCQ7 364 aaPredicted RBP16.04■□□□□ 0.16
SP140-213ENST00000543928 MKL1Q969V6 931 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 C12orf42Q96LP6 360 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 UBAC1Q9BSL1 405 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 TNKSO95271 1327 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 BTBD19C9JJ37 291 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 RAD21O60216 631 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 MCM5P33992 734 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 ANTXR2P58335 489 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 KIAA1755Q5JYT7 1200 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 TREML2Q5T2D2 321 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 RCSD1Q6JBY9 416 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 GPAT2Q6NUI2 795 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 ANKRD23Q86SG2 305 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 ENAHQ8N8S7 591 aaPredicted RBP16.03■□□□□ 0.16
SP140-213ENST00000543928 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
SP140-213ENST00000543928 TTC14Q96N46 770 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 AGTPBP1Q9UPW5 1226 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 LOC285556D6RIA3 1793 aa16.03■□□□□ 0.16
SP140-213ENST00000543928 IFIT3O14879 490 aaKnown RBP16.02■□□□□ 0.16
SP140-213ENST00000543928 PRC1O43663 620 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 TOP1P11387 765 aaKnown RBP16.02■□□□□ 0.16
SP140-213ENST00000543928 VCAM1P19320 739 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
SP140-213ENST00000543928 OTUD7BQ6GQQ9 843 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 JMYQ8N9B5 988 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 SYNPO2Q9UMS6 1093 aa16.02■□□□□ 0.16
SP140-213ENST00000543928 ERICH2A1L162 156 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 F5H6K3 240 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 PDHXO00330 501 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 KLRC3Q07444 240 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 SART3Q15020 963 aaKnown RBP16.01■□□□□ 0.15
SP140-213ENST00000543928 SEC23AQ15436 765 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 LPAR1Q92633 364 aa16.01■□□□□ 0.15
SP140-213ENST00000543928 NDUFB10O96000 172 aa16■□□□□ 0.15
SP140-213ENST00000543928 ALDH1A1P00352 501 aa16■□□□□ 0.15
SP140-213ENST00000543928 HMGB1P09429 215 aaKnown RBP16■□□□□ 0.15
SP140-213ENST00000543928 CPA1P15085 419 aa16■□□□□ 0.15
SP140-213ENST00000543928 PSMA5P28066 241 aa16■□□□□ 0.15
SP140-213ENST00000543928 PABPC4Q13310 644 aaKnown RBP eCLIP16■□□□□ 0.15
SP140-213ENST00000543928 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
SP140-213ENST00000543928 DHX32Q7L7V1 743 aaKnown RBP16■□□□□ 0.15
SP140-213ENST00000543928 GMCL1P1Q8NEA9 526 aa16■□□□□ 0.15
SP140-213ENST00000543928 BACH2Q9BYV9 841 aa16■□□□□ 0.15
SP140-213ENST00000543928 RPAP3Q9H6T3 665 aaPredicted RBP16■□□□□ 0.15
SP140-213ENST00000543928 ZCCHC17Q9NP64 241 aaKnown RBP16■□□□□ 0.15
SP140-213ENST00000543928 RNF186Q9NXI6 227 aa16■□□□□ 0.15
SP140-213ENST00000543928 SLC45A1Q9Y2W3 748 aa16■□□□□ 0.15
SP140-213ENST00000543928 WDR46O15213 610 aaKnown RBP15.99■□□□□ 0.15
SP140-213ENST00000543928 TRPA1O75762 1119 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
SP140-213ENST00000543928 HOXA7P31268 230 aaPredicted RBP15.99■□□□□ 0.15
SP140-213ENST00000543928 ANAPC15P60006 121 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 EXOSC10Q01780 885 aaKnown RBP15.99■□□□□ 0.15
SP140-213ENST00000543928 WTAPQ15007 396 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 TAF1CQ15572 869 aaPredicted RBP15.99■□□□□ 0.15
SP140-213ENST00000543928 SLFN13Q68D06 897 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 BLOC1S2Q6QNY1 142 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 IGDCC4Q8TDY8 1250 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 TMEM87BQ96K49 555 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 MTA3Q9BTC8 594 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 BEGAINQ9BUH8 593 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 LRRC2Q9BYS8 371 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 SENP2Q9HC62 589 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 GPHNQ9NQX3 736 aaPredicted RBP15.99■□□□□ 0.15
SP140-213ENST00000543928 WBP1LQ9NX94 342 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 MTMR7Q9Y216 660 aa15.99■□□□□ 0.15
SP140-213ENST00000543928 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L15C9J2P7 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L13C9JLJ4 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L11C9JVI0 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L18D6R9N7 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L22D6RA61 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L17D6RBQ6 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L19D6RCP7 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L20D6RJB6 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 SH2B2O14492 632 aaPredicted RBP15.98■□□□□ 0.15
SP140-213ENST00000543928 CYP2C8P10632 490 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 OSBPP22059 807 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 USP17L24Q0WX57 530 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 FAM83BQ5T0W9 1011 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
SP140-213ENST00000543928 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 PARK7Q99497 189 aaKnown RBP15.98■□□□□ 0.15
SP140-213ENST00000543928 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
SP140-213ENST00000543928 C22orf23Q9BZE7 217 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 TM6SF1Q9BZW5 370 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms