RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 SMCO2A6NFE2 343 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 TRAK2O60296 914 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 GOLGA8HP0CJ92 632 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 MKRN3Q13064 507 aaKnown RBP8.86□□□□□ -0.99
LRP6-206ENST00000543091 SEPT2Q15019 361 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 SYDE2Q5VT97 1194 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 DTHD1Q6ZMT9 781 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 ANKRD13AQ8IZ07 590 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 CNNM3Q8NE01 707 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 NEDD1Q8NHV4 660 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 PHKBQ93100 1093 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 GTF3C6Q969F1 213 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 SCG2P13521 617 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 HUNKP57058 714 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 USP50Q70EL3 339 aaPredicted RBP8.86□□□□□ -0.99
LRP6-206ENST00000543091 TRMT1LQ7Z2T5 733 aaKnown RBP8.86□□□□□ -0.99
LRP6-206ENST00000543091 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
LRP6-206ENST00000543091 CTAGE5O15320 804 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 F13A1P00488 732 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 IDEP14735 1019 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 UBA5Q9GZZ9 404 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 FBXO40Q9UH90 709 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 CELF2O95319 508 aaKnown RBP8.85□□□□□ -0.99
LRP6-206ENST00000543091 NECTIN1Q15223 517 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 RNF26Q9BY78 433 aaPredicted RBP8.85□□□□□ -0.99
LRP6-206ENST00000543091 C19orf81C9J6K1 198 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 COPB2P35606 906 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 ECE1P42892 770 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 DACT2Q5SW24 774 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 ARHGEF16Q5VV41 709 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 TSG101Q99816 390 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 SH2B2O14492 632 aaPredicted RBP8.85□□□□□ -0.99
LRP6-206ENST00000543091 MCM7P33993 719 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 ZNF157P51786 506 aaPredicted RBP8.85□□□□□ -0.99
LRP6-206ENST00000543091 KRT40Q6A162 431 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 KCTD1Q719H9 257 aa8.85□□□□□ -0.99
LRP6-206ENST00000543091 PRMT6Q96LA8 375 aaPredicted RBP8.85□□□□□ -0.99
LRP6-206ENST00000543091 DDX19AQ9NUU7 478 aaKnown RBP8.85□□□□□ -0.99
LRP6-206ENST00000543091 WDR19Q8NEZ3 1342 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 OFD1O75665 1012 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
LRP6-206ENST00000543091 PIK3AP1Q6ZUJ8 805 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 FAM83AQ86UY5 434 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 DNAI2Q9GZS0 605 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 FEM1BQ9UK73 627 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 NOD1Q9Y239 953 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 SPTLC2O15270 562 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 MCM4P33991 863 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 MRE11P49959 708 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 SNAPC2Q13487 334 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 HAUS3Q68CZ6 603 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 SLC44A5Q8NCS7 719 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 ELP3Q9H9T3 547 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 POTEB2H3BUK9 544 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 CTNND1O60716 968 aaKnown RBP8.84□□□□□ -0.99
LRP6-206ENST00000543091 FGFR1OPO95684 399 aaKnown RBP8.84□□□□□ -0.99
LRP6-206ENST00000543091 VIL1P09327 827 aaKnown RBP8.84□□□□□ -0.99
LRP6-206ENST00000543091 PDIA3P30101 505 aaKnown RBP8.84□□□□□ -0.99
LRP6-206ENST00000543091 SP4Q02446 784 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 PDE4DQ08499 809 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 MAP3K11Q16584 847 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 NLGN2Q8NFZ4 835 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 NAP1L5Q96NT1 182 aaPredicted RBP8.84□□□□□ -0.99
LRP6-206ENST00000543091 AZI2Q9H6S1 392 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 RRAGCQ9HB90 399 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 RGPD2P0DJD1 1756 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 CACNA1FO60840 1977 aa8.84□□□□□ -0.99
LRP6-206ENST00000543091 EEF2P13639 858 aaKnown RBP8.84□□□□□ -1
LRP6-206ENST00000543091 TRIM21P19474 475 aaKnown RBP8.84□□□□□ -1
LRP6-206ENST00000543091 SYT1P21579 422 aa8.84□□□□□ -1
LRP6-206ENST00000543091 STAT6P42226 847 aa8.84□□□□□ -1
LRP6-206ENST00000543091 NCBP1Q09161 790 aaKnown RBP8.84□□□□□ -1
LRP6-206ENST00000543091 HSP90AA2PQ14568 343 aaPredicted RBP8.84□□□□□ -1
LRP6-206ENST00000543091 SLFNL1Q499Z3 407 aa8.84□□□□□ -1
LRP6-206ENST00000543091 PDILTQ8N807 584 aa8.84□□□□□ -1
LRP6-206ENST00000543091 LPAR1Q92633 364 aa8.84□□□□□ -1
LRP6-206ENST00000543091 SLF1Q9BQI6 1058 aa8.84□□□□□ -1
LRP6-206ENST00000543091 VPS54Q9P1Q0 977 aa8.84□□□□□ -1
LRP6-206ENST00000543091 DOT1LQ8TEK3 1739 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L15C9J2P7 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L11C9JVI0 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L18D6R9N7 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L22D6RA61 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L19D6RCP7 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L20D6RJB6 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 USP17L24Q0WX57 530 aa8.83□□□□□ -1
LRP6-206ENST00000543091 ADCK5Q3MIX3 580 aa8.83□□□□□ -1
LRP6-206ENST00000543091 FKBP1CQ5VVH2 108 aa8.83□□□□□ -1
LRP6-206ENST00000543091 BLIDQ8IZY5 108 aa8.83□□□□□ -1
LRP6-206ENST00000543091 MRIQ9BWK5 157 aa8.83□□□□□ -1
LRP6-206ENST00000543091 TMEM39BQ9GZU3 492 aa8.83□□□□□ -1
LRP6-206ENST00000543091 RABGAP1Q9Y3P9 1069 aa8.83□□□□□ -1
LRP6-206ENST00000543091 DLG5Q8TDM6 1919 aa8.83□□□□□ -1
LRP6-206ENST00000543091 hCG_1642624A0A1W2PR95 340 aa8.83□□□□□ -1
LRP6-206ENST00000543091 IBSPP21815 317 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms