RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 DPCR1Q3MIW9 517 aa16.27■□□□□ 0.2
LDB3-207ENST00000542786 METTL16Q86W50 562 aaKnown RBP16.27■□□□□ 0.2
LDB3-207ENST00000542786 C7orf43Q8WVR3 580 aa16.27■□□□□ 0.2
LDB3-207ENST00000542786 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
LDB3-207ENST00000542786 KCNH3Q9ULD8 1083 aa16.27■□□□□ 0.2
LDB3-207ENST00000542786 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.19
LDB3-207ENST00000542786 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.19
LDB3-207ENST00000542786 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.19
LDB3-207ENST00000542786 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.19
LDB3-207ENST00000542786 LONRF3Q496Y0 759 aa16.27■□□□□ 0.19
LDB3-207ENST00000542786 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.19
LDB3-207ENST00000542786 POTEAQ6S8J7 498 aa16.27■□□□□ 0.19
LDB3-207ENST00000542786 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.19
LDB3-207ENST00000542786 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.19
LDB3-207ENST00000542786 CEP57L1Q8IYX8 460 aa16.27■□□□□ 0.19
LDB3-207ENST00000542786 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.19
LDB3-207ENST00000542786 SCN9AQ15858 1988 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 BAZ2BQ9UIF8 2168 aaKnown RBP16.26■□□□□ 0.19
LDB3-207ENST00000542786 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 M0R2N6 131 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 GNAQP50148 359 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 NLRP12P59046 1061 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 SLC15A2Q16348 729 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
LDB3-207ENST00000542786 GREB1LQ9C091 1923 aaPredicted RBP16.25■□□□□ 0.19
LDB3-207ENST00000542786 FKBP1AP62942 108 aaKnown RBP16.25■□□□□ 0.19
LDB3-207ENST00000542786 RASGRP2Q7LDG7 609 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
LDB3-207ENST00000542786 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
LDB3-207ENST00000542786 KCNQ5Q9NR82 932 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 CDC25BP30305 580 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 PLCB2Q00722 1185 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
LDB3-207ENST00000542786 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 USP49Q70CQ1 688 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 PODNQ7Z5L7 613 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
LDB3-207ENST00000542786 DAGLBQ8NCG7 672 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 CEP95Q96GE4 821 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 KCNF1Q9H3M0 494 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
LDB3-207ENST00000542786 MYO3BQ8WXR4 1341 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 F8W031 263 aaPredicted RBP16.24■□□□□ 0.19
LDB3-207ENST00000542786 H0YIN7 160 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 BMP15O95972 392 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
LDB3-207ENST00000542786 TRAPPC10P48553 1259 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 DACT2Q5SW24 774 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 AOPEPQ8N6M6 819 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 GPKOWQ92917 476 aaPredicted RBP eCLIP16.24■□□□□ 0.19
LDB3-207ENST00000542786 LZTS2Q9BRK4 669 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 MRIQ9BWK5 157 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 CSRNP2Q9H175 543 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 TTC12Q9H892 705 aaPredicted RBP16.24■□□□□ 0.19
LDB3-207ENST00000542786 SIPA1L1O43166 1804 aa16.24■□□□□ 0.19
LDB3-207ENST00000542786 ACTN4O43707 911 aaKnown RBP16.23■□□□□ 0.19
LDB3-207ENST00000542786 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 CHRNA5P30532 468 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 SCNN1DP51172 638 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 NLRP5P59047 1200 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 ATP2C1P98194 919 aaPredicted RBP16.23■□□□□ 0.19
LDB3-207ENST00000542786 PNOCQ13519 176 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 NCAPHQ15003 741 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 TTC38Q5R3I4 469 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 FAM177A1Q8N128 213 aaPredicted RBP16.23■□□□□ 0.19
LDB3-207ENST00000542786 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 ZNF830Q96NB3 372 aaPredicted RBP16.23■□□□□ 0.19
LDB3-207ENST00000542786 DBNDD1Q9H9R9 158 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 STX8Q9UNK0 236 aa16.23■□□□□ 0.19
LDB3-207ENST00000542786 STXBP3O00186 592 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 BIN1O00499 593 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 FOXN1O15353 648 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 CALML3P27482 149 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 PIBF1Q8WXW3 757 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 ZDHHC15Q96MV8 337 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 NAT10Q9H0A0 1025 aaKnown RBP16.22■□□□□ 0.19
LDB3-207ENST00000542786 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
LDB3-207ENST00000542786 USP40Q9NVE5 1235 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 PCDHA4Q9UN74 947 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 A0A087X0B3 334 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 OFD1O75665 1012 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 SHMT1P34896 483 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
LDB3-207ENST00000542786 PICALMQ13492 652 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 NT5DC1Q5TFE4 455 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 STRIP1Q5VSL9 837 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 BLIDQ8IZY5 108 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 MRFAP1L1Q96HT8 127 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 TRIM5Q9C035 493 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 BARHL2Q9NY43 387 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 MTMR4Q9NYA4 1195 aa16.22■□□□□ 0.19
LDB3-207ENST00000542786 FAM13BQ9NYF5 915 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms