RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DCDC2BA2VCK2 349 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 ARVCFO00192 962 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 PDGFBP01127 241 aaPredicted RBP4.19□□□□□ -1.74
CHD4-209ENST00000542717 ADRB1P08588 477 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 HOXC6P09630 235 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 KCNA4P22459 653 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 ATXN1P54253 815 aaKnown RBP4.19□□□□□ -1.74
CHD4-209ENST00000542717 MTMR2Q13614 643 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 TTLL4Q14679 1199 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 CC2D1BQ5T0F9 858 aaKnown RBP4.19□□□□□ -1.74
CHD4-209ENST00000542717 HDGFL1Q5TGJ6 251 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 OLFML2BQ68BL8 750 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 CDC42EP5Q6NZY7 148 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 SPRED2Q7Z698 418 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 DEFB128Q7Z7B8 93 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 LURAP1LQ8IV03 231 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 HERC6Q8IVU3 1022 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 TBC1D22AQ8WUA7 517 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 PABPC5Q96DU9 382 aaKnown RBP4.19□□□□□ -1.74
CHD4-209ENST00000542717 TSEN34Q9BSV6 310 aaKnown RBP4.19□□□□□ -1.74
CHD4-209ENST00000542717 SUGCTQ9HAC7 445 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 USP40Q9NVE5 1235 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 CTNNA3Q9UI47 895 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 CHMP3Q9Y3E7 222 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 UMODL1Q5DID0 1318 aa4.19□□□□□ -1.74
CHD4-209ENST00000542717 ANKRD18BA2A2Z9 1011 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 MOXD2PA6NHM9 499 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 USP17L5A8MUK1 530 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 SLURP2P0DP57 97 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 ADORA2AP29274 412 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 HOXA7P31268 230 aaPredicted RBP4.18□□□□□ -1.74
CHD4-209ENST00000542717 KCNJ6P48051 423 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 RGS3P49796 1198 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 GRB14Q14449 540 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 SMAD2Q15796 467 aaKnown RBP4.18□□□□□ -1.74
CHD4-209ENST00000542717 KCNA10Q16322 511 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 PTPROQ16827 1216 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 TIGD5Q53EQ6 642 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 TAF7LQ5H9L4 462 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 HHIPL2Q6UWX4 724 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 ZFPM1Q8IX07 1006 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 DCLK2Q8N568 766 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 BANK1Q8NDB2 785 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 CYP2W1Q8TAV3 490 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 PHOSPHO2Q8TCD6 241 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 LENG1Q96BZ8 264 aaPredicted RBP4.18□□□□□ -1.74
CHD4-209ENST00000542717 SCLYQ96I15 445 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 RIPOR3Q96MK2 946 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 TGS1Q96RS0 853 aaKnown RBP4.18□□□□□ -1.74
CHD4-209ENST00000542717 HAUS7Q99871 368 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 TBC1D2Q9BYX2 928 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 FTOQ9C0B1 505 aaKnown RBP eCLIP4.18□□□□□ -1.74
CHD4-209ENST00000542717 MFSD1Q9H3U5 465 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 HYPKQ9NX55 129 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 FAM198AQ9UFP1 575 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 CDV3Q9UKY7 258 aaKnown RBP4.18□□□□□ -1.74
CHD4-209ENST00000542717 RABGAP1Q9Y3P9 1069 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 ELP1O95163 1332 aa4.18□□□□□ -1.74
CHD4-209ENST00000542717 USP24Q9UPU5 2620 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 COL4A4P53420 1690 aaPredicted RBP4.17□□□□□ -1.74
CHD4-209ENST00000542717 PHIPQ8WWQ0 1821 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 A0A1B0GUL7 405 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 LCHNA4D1U4 455 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 FAM196BA6NMK8 535 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 MBTPS2O43462 519 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 SLC4A2P04920 1241 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 PFKMP08237 780 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 C6orf222P0C671 652 aaPredicted RBP4.17□□□□□ -1.74
CHD4-209ENST00000542717 AKR1A1P14550 325 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 CDK7P50613 346 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 SMAD4Q13485 552 aaKnown RBP4.17□□□□□ -1.74
CHD4-209ENST00000542717 PICALMQ13492 652 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 TCEAL5Q5H9L2 206 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 SH3D19Q5HYK7 790 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 UBE3BQ7Z3V4 1068 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 RPAINQ86UA6 219 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 FAM126BQ8IXS8 530 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 TMEM105Q8N8V8 129 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 PCSK9Q8NBP7 692 aaKnown RBP4.17□□□□□ -1.74
CHD4-209ENST00000542717 FBXO22Q8NEZ5 403 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 RUBCNQ92622 972 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 ASIC4Q96FT7 647 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 MRIQ9BWK5 157 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
CHD4-209ENST00000542717 SEMA4AQ9H3S1 761 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 SPC25Q9HBM1 224 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 CNNM1Q9NRU3 951 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 DOCK1Q14185 1865 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 SMCHD1A6NHR9 2005 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 KIF16BQ96L93 1317 aa4.17□□□□□ -1.74
CHD4-209ENST00000542717 DMXL1Q9Y485 3027 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 CEP250Q9BV73 2442 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 EIF4E1BA6NMX2 242 aaKnown RBP4.16□□□□□ -1.74
CHD4-209ENST00000542717 C19orf81C9J6K1 198 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 USP17L10C9JJH3 530 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 NCK2O43639 380 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 STRNO43815 780 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 ADAMTS4O75173 837 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 ENTPD3O75355 529 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 DDX58O95786 925 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms