RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 KRTAP9-9Q9BYP9 154 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 KRTAP9-4Q9BYQ2 154 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 GPR62Q9BZJ7 368 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 ADAMTS10Q9H324 1103 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 BRMS1Q9HCU9 246 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.27□□□□□ -1.09
XRCC4-206ENST00000542685 SRFP11831 508 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 GBP1P32455 592 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 CHMP4BP1P59074 171 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 FZD5Q13467 585 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 MLECQ14165 292 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 PKN1Q16512 942 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 GAB4Q2WGN9 574 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 TSPYL5Q86VY4 417 aaPredicted RBP8.27□□□□□ -1.09
XRCC4-206ENST00000542685 ZNF296Q8WUU4 475 aaPredicted RBP8.27□□□□□ -1.09
XRCC4-206ENST00000542685 TMEM59LQ9UK28 342 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 PCDHB14Q9Y5E9 798 aa8.27□□□□□ -1.09
XRCC4-206ENST00000542685 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
XRCC4-206ENST00000542685 ROBO2Q9HCK4 1378 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 GREM1O60565 184 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 RAC2P15153 192 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 LTKP29376 864 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 ERVFC1P60507 584 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 EGR3Q06889 387 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 ARSHQ5FYA8 562 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
XRCC4-206ENST00000542685 SLC22A31A6NKX4 558 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 CRKP46108 304 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 MESP2Q0VG99 397 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 TMCO4Q5TGY1 634 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 FAM84AQ96KN4 292 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 ASPNQ9BXN1 380 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 ADAMTS1Q9UHI8 967 aa8.25□□□□□ -1.09
XRCC4-206ENST00000542685 EIF4G1Q04637 1599 aaKnown RBP8.24□□□□□ -1.09
XRCC4-206ENST00000542685 JAG1P78504 1218 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 SEZ6Q53EL9 994 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 PRR23BQ6ZRT6 265 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 TMEM87AQ8NBN3 555 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 MYLIPQ8WY64 445 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 LRRC3Q9BY71 257 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 UBP1Q9NZI7 540 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 GMIPQ9P107 970 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
XRCC4-206ENST00000542685 SHISA3A0PJX4 238 aa8.23□□□□□ -1.09
XRCC4-206ENST00000542685 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
XRCC4-206ENST00000542685 RGS13O14921 159 aa8.23□□□□□ -1.09
XRCC4-206ENST00000542685 RAG1P15918 1043 aa8.23□□□□□ -1.09
XRCC4-206ENST00000542685 CLEC16AQ2KHT3 1053 aa8.23□□□□□ -1.09
XRCC4-206ENST00000542685 UBOX5O94941 541 aa8.22□□□□□ -1.09
XRCC4-206ENST00000542685 ZNF16P17020 682 aaPredicted RBP8.22□□□□□ -1.09
XRCC4-206ENST00000542685 MCM4P33991 863 aa8.22□□□□□ -1.09
XRCC4-206ENST00000542685 GK5Q6ZS86 529 aa8.22□□□□□ -1.09
XRCC4-206ENST00000542685 DIRC2Q96SL1 478 aa8.22□□□□□ -1.09
XRCC4-206ENST00000542685 ATE1O95260 518 aa8.21□□□□□ -1.1
XRCC4-206ENST00000542685 POLR2BP30876 1174 aaKnown RBP8.21□□□□□ -1.1
XRCC4-206ENST00000542685 TRHRP34981 398 aaPredicted RBP8.21□□□□□ -1.1
XRCC4-206ENST00000542685 APOBRQ0VD83 1088 aa8.21□□□□□ -1.1
XRCC4-206ENST00000542685 OVOS1Q6IE37 1185 aa8.21□□□□□ -1.1
XRCC4-206ENST00000542685 RBM47A0AV96 593 aaKnown RBP8.2□□□□□ -1.1
XRCC4-206ENST00000542685 HPXP02790 462 aa8.2□□□□□ -1.1
XRCC4-206ENST00000542685 CLCQ05315 142 aa8.2□□□□□ -1.1
XRCC4-206ENST00000542685 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
XRCC4-206ENST00000542685 VWCEQ96DN2 955 aa8.2□□□□□ -1.1
XRCC4-206ENST00000542685 ASCC2Q9H1I8 757 aaPredicted RBP8.2□□□□□ -1.1
XRCC4-206ENST00000542685 NSUN3Q9H649 340 aaKnown RBP8.2□□□□□ -1.1
XRCC4-206ENST00000542685 C19orf44Q9H6X5 657 aa8.2□□□□□ -1.1
XRCC4-206ENST00000542685 EHMT1Q9H9B1 1298 aa8.2□□□□□ -1.1
XRCC4-206ENST00000542685 LOC105371045A0A1W2PR82 267 aa8.19□□□□□ -1.1
XRCC4-206ENST00000542685 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
XRCC4-206ENST00000542685 ZGLP1P0C6A0 271 aa8.19□□□□□ -1.1
XRCC4-206ENST00000542685 LDLRAD1Q5T700 205 aa8.19□□□□□ -1.1
XRCC4-206ENST00000542685 ATG4CQ96DT6 458 aa8.19□□□□□ -1.1
XRCC4-206ENST00000542685 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.19□□□□□ -1.1
XRCC4-206ENST00000542685 KCNK12Q9HB15 430 aa8.19□□□□□ -1.1
XRCC4-206ENST00000542685 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
XRCC4-206ENST00000542685 BAZ1AQ9NRL2 1556 aaPredicted RBP8.18□□□□□ -1.1
XRCC4-206ENST00000542685 RNF4P78317 190 aa8.18□□□□□ -1.1
XRCC4-206ENST00000542685 NMIQ13287 307 aaPredicted RBP8.18□□□□□ -1.1
XRCC4-206ENST00000542685 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
XRCC4-206ENST00000542685 SYDE1Q6ZW31 735 aaPredicted RBP8.18□□□□□ -1.1
XRCC4-206ENST00000542685 PDZD8Q8NEN9 1154 aa8.18□□□□□ -1.1
XRCC4-206ENST00000542685 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
XRCC4-206ENST00000542685 NKD1Q969G9 470 aa8.18□□□□□ -1.1
XRCC4-206ENST00000542685 SPON2Q9BUD6 331 aa8.18□□□□□ -1.1
XRCC4-206ENST00000542685 ANTXR1Q9H6X2 564 aa8.18□□□□□ -1.1
XRCC4-206ENST00000542685 ZNF165P49910 485 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 TEKQ02763 1124 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
XRCC4-206ENST00000542685 NLRC3Q7RTR2 1065 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 REXO1Q8N1G1 1221 aaKnown RBP8.17□□□□□ -1.1
XRCC4-206ENST00000542685 OXR1Q8N573 874 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 ZNF512BQ96KM6 892 aaPredicted RBP8.17□□□□□ -1.1
XRCC4-206ENST00000542685 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 BACH2Q9BYV9 841 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 RNF32Q9H0A6 362 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 CNNM2Q9H8M5 875 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 NACADO15069 1562 aa8.17□□□□□ -1.1
XRCC4-206ENST00000542685 ZNF76P36508 570 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms