RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PNMA1Q8ND90 353 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 CNKSR2Q8WXI2 1034 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 CCDC102AQ96A19 550 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 WNK4Q96J92 1243 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 SLC12A7Q9Y666 1083 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 ATAD5Q96QE3 1844 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 IRF6O14896 467 aa27.05■■□□□ 1.92
HOMER3-205ENST00000542541 ZBTB48P10074 688 aaPredicted RBP27.05■■□□□ 1.92
HOMER3-205ENST00000542541 AK2P54819 239 aa27.05■■□□□ 1.92
HOMER3-205ENST00000542541 TOB2Q14106 344 aaPredicted RBP27.05■■□□□ 1.92
HOMER3-205ENST00000542541 LRRC47Q8N1G4 583 aaKnown RBP27.05■■□□□ 1.92
HOMER3-205ENST00000542541 SENP2Q9HC62 589 aa27.05■■□□□ 1.92
HOMER3-205ENST00000542541 KCNH4Q9UQ05 1017 aa27.05■■□□□ 1.92
HOMER3-205ENST00000542541 MTMR2Q13614 643 aa27.04■■□□□ 1.92
HOMER3-205ENST00000542541 SPRYD7Q5W111 196 aa27.04■■□□□ 1.92
HOMER3-205ENST00000542541 GMCL1P1Q8NEA9 526 aa27.04■■□□□ 1.92
HOMER3-205ENST00000542541 EVCP57679 992 aa27.03■■□□□ 1.92
HOMER3-205ENST00000542541 USP17L2Q6R6M4 530 aa27.03■■□□□ 1.92
HOMER3-205ENST00000542541 VCPKMTQ9H867 229 aa27.03■■□□□ 1.92
HOMER3-205ENST00000542541 F5H6K3 240 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 RAD21O60216 631 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 CALM1P0DP23 149 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 CALM2P0DP24 149 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 CALM3P0DP25 149 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 MCM2P49736 904 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 KLRC3Q07444 240 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 APOBRQ0VD83 1088 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 SNAPC2Q13487 334 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 ZNF654Q8IZM8 581 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 LPAR1Q92633 364 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 TMOD4Q9NZQ9 345 aa27.02■■□□□ 1.92
HOMER3-205ENST00000542541 KLF18A0A0U1RQI7 1052 aa27.01■■□□□ 1.92
HOMER3-205ENST00000542541 DDAH1O94760 285 aa27.01■■□□□ 1.92
HOMER3-205ENST00000542541 GTF2A2P52657 109 aa27.01■■□□□ 1.92
HOMER3-205ENST00000542541 ZYXQ15942 572 aaKnown RBP27.01■■□□□ 1.92
HOMER3-205ENST00000542541 DEFB115Q30KQ5 88 aa27.01■■□□□ 1.92
HOMER3-205ENST00000542541 SH3D19Q5HYK7 790 aa27.01■■□□□ 1.92
HOMER3-205ENST00000542541 RASAL3Q86YV0 1011 aa27.01■■□□□ 1.92
HOMER3-205ENST00000542541 GJA5P36382 358 aa27.01■■□□□ 1.91
HOMER3-205ENST00000542541 RCAN1P53805 252 aa27.01■■□□□ 1.91
HOMER3-205ENST00000542541 SLFN13Q68D06 897 aa27.01■■□□□ 1.91
HOMER3-205ENST00000542541 APOA5Q6Q788 366 aa27.01■■□□□ 1.91
HOMER3-205ENST00000542541 BRPF3Q9ULD4 1205 aa27.01■■□□□ 1.91
HOMER3-205ENST00000542541 NAP1L2Q9ULW6 460 aaPredicted RBP27.01■■□□□ 1.91
HOMER3-205ENST00000542541 LIMCH1Q9UPQ0 1083 aa27.01■■□□□ 1.91
HOMER3-205ENST00000542541 RASSF10A6NK89 507 aa27■■□□□ 1.91
HOMER3-205ENST00000542541 SLC10A3P09131 477 aa27■■□□□ 1.91
HOMER3-205ENST00000542541 HMGCS2P54868 508 aa27■■□□□ 1.91
HOMER3-205ENST00000542541 PAXIP1Q6ZW49 1069 aaPredicted RBP27■■□□□ 1.91
HOMER3-205ENST00000542541 ZNF274Q96GC6 653 aaPredicted RBP27■■□□□ 1.91
HOMER3-205ENST00000542541 A0A0G2JLL6 359 aaPredicted RBP26.99■■□□□ 1.91
HOMER3-205ENST00000542541 ZBTB43O43298 467 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 TROAPQ12815 778 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 FASTKD5Q7L8L6 764 aaKnown RBP26.99■■□□□ 1.91
HOMER3-205ENST00000542541 PRRT2Q7Z6L0 340 aaPredicted RBP26.99■■□□□ 1.91
HOMER3-205ENST00000542541 NUP133Q8WUM0 1156 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 GMCL1Q96IK5 515 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 C12orf42Q96LP6 360 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 MAP3K14Q99558 947 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 EMILIN3Q9NT22 766 aa26.99■■□□□ 1.91
HOMER3-205ENST00000542541 NDUFB10O96000 172 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 CETPP11597 493 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 SLC1A4P43007 532 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 DCAF4Q8WV16 495 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 MTMR7Q9Y216 660 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 NOL8Q76FK4 1167 aaKnown RBP26.98■■□□□ 1.91
HOMER3-205ENST00000542541 SPICE1Q8N0Z3 855 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 PROCA1Q8NCQ7 364 aaPredicted RBP26.98■■□□□ 1.91
HOMER3-205ENST00000542541 ZSCAN31Q96LW9 406 aaPredicted RBP26.98■■□□□ 1.91
HOMER3-205ENST00000542541 LARP6Q9BRS8 491 aaKnown RBP26.98■■□□□ 1.91
HOMER3-205ENST00000542541 TPCN1Q9ULQ1 816 aa26.98■■□□□ 1.91
HOMER3-205ENST00000542541 GOLGA8BA8MQT2 603 aa26.97■■□□□ 1.91
HOMER3-205ENST00000542541 PDHBP11177 359 aa26.97■■□□□ 1.91
HOMER3-205ENST00000542541 PDIA3P30101 505 aaKnown RBP26.97■■□□□ 1.91
HOMER3-205ENST00000542541 KIF5BP33176 963 aa26.97■■□□□ 1.91
HOMER3-205ENST00000542541 MKRN3Q13064 507 aaKnown RBP26.97■■□□□ 1.91
HOMER3-205ENST00000542541 PPP2R5BQ15173 497 aa26.97■■□□□ 1.91
HOMER3-205ENST00000542541 MICU3Q86XE3 530 aa26.97■■□□□ 1.91
HOMER3-205ENST00000542541 CTCFLQ8NI51 663 aaPredicted RBP26.97■■□□□ 1.91
HOMER3-205ENST00000542541 WDR46O15213 610 aaKnown RBP26.96■■□□□ 1.91
HOMER3-205ENST00000542541 PARP1P09874 1014 aaKnown RBP26.96■■□□□ 1.91
HOMER3-205ENST00000542541 SNHG28P0DPA3 235 aa26.96■■□□□ 1.91
HOMER3-205ENST00000542541 HSPA6P17066 643 aa26.96■■□□□ 1.91
HOMER3-205ENST00000542541 GPATCH4Q5T3I0 446 aaKnown RBP26.96■■□□□ 1.91
HOMER3-205ENST00000542541 FANCBQ8NB91 859 aa26.96■■□□□ 1.91
HOMER3-205ENST00000542541 MYL10Q9BUA6 226 aa26.96■■□□□ 1.91
HOMER3-205ENST00000542541 PHIPQ8WWQ0 1821 aa26.96■■□□□ 1.91
HOMER3-205ENST00000542541 MANSC4A6NHS7 340 aaPredicted RBP26.95■■□□□ 1.91
HOMER3-205ENST00000542541 FAM155AB1AL88 458 aaPredicted RBP26.95■■□□□ 1.91
HOMER3-205ENST00000542541 BMP3P12645 472 aa26.95■■□□□ 1.91
HOMER3-205ENST00000542541 ASPRV1Q53RT3 343 aa26.95■■□□□ 1.91
HOMER3-205ENST00000542541 MS4A4AQ96JQ5 239 aa26.95■■□□□ 1.91
HOMER3-205ENST00000542541 MYH4Q9Y623 1939 aa26.95■■□□□ 1.9
HOMER3-205ENST00000542541 CCDC196A0A1B0GTZ2 297 aa26.94■■□□□ 1.9
HOMER3-205ENST00000542541 VCAM1P19320 739 aa26.94■■□□□ 1.9
HOMER3-205ENST00000542541 METAP2P50579 478 aaKnown RBP eCLIP26.94■■□□□ 1.9
HOMER3-205ENST00000542541 INHBEP58166 350 aa26.94■■□□□ 1.9
HOMER3-205ENST00000542541 HTRA3P83110 453 aa26.94■■□□□ 1.9
HOMER3-205ENST00000542541 GRM4Q14833 912 aa26.94■■□□□ 1.9
HOMER3-205ENST00000542541 CCDC96Q2M329 555 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms