RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 CYBAP13498 195 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 CNGA1P29973 690 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 CAP2P40123 477 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 ADGRE1Q14246 886 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 C1orf53Q5VUE5 145 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 CCAR1Q8IX12 1150 aaKnown RBP9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 ANKRD44Q8N8A2 993 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 KLHDC4Q8TBB5 520 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 PAGR1Q9BTK6 254 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 PRDM12Q9H4Q4 367 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 BICC1Q9H694 974 aaKnown RBP9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 AS3MTQ9HBK9 375 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 REV3LO60673 3130 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 TCF20Q9UGU0 1960 aaKnown RBP9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 ZNF236Q9UL36 1845 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 ALDH1L1O75891 902 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 IGHA2P01877 340 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 HOXC6P09630 235 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 NBPF7P0C2Y1 421 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 SLC5A1P13866 664 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 CYP2C19P33261 490 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 BTDP43251 543 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 BACE1P56817 501 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 TLE2Q04725 743 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 FPGSQ05932 587 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 CCDC85BQ15834 202 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 ALYREFQ86V81 257 aaKnown RBP9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 ARRDC4Q8NCT1 418 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 GTF3C2Q8WUA4 911 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 LPIN2Q92539 896 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 EDC3Q96F86 508 aaKnown RBP9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 WDR18Q9BV38 432 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 TMOD4Q9NZQ9 345 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 CHD7Q9P2D1 2997 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 PLXNA1Q9UIW2 1896 aa9.51□□□□□ -0.89
NPIPB4-215ENST00000542133 LOC102724159A0A0B4J2E5 919 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 KIAA0355O15063 1070 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 CLTBP09497 229 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 BMP1P13497 986 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 PBX2P40425 430 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 PWP2Q15269 919 aaKnown RBP9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 TMEM31Q5JXX7 168 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 PBX4Q9BYU1 374 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 EPHX3Q9H6B9 360 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 STK24Q9Y6E0 443 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 MROH7-TTC4A0A0A0MT08 1334 aa9.5□□□□□ -0.89
NPIPB4-215ENST00000542133 LRRC37A2A6NM11 1700 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 SLC15A5A6NIM6 579 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 SEMA3EO15041 775 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 CNMDO75829 334 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 GLRX3O76003 335 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 PTPREP23469 700 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 RHBDL3P58872 404 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 GRB14Q14449 540 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 ANO1Q5XXA6 986 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 FAM43BQ6ZT52 329 aaPredicted RBP9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 DZIP1Q86YF9 867 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 NPLOC4Q8TAT6 608 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 FERMT2Q96AC1 680 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 SRCIN1Q9C0H9 1055 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 C11orf16Q9NQ32 467 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 TACC3Q9Y6A5 838 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 FANCIQ9NVI1 1328 aa9.49□□□□□ -0.89
NPIPB4-215ENST00000542133 VAMP4O75379 141 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 RAG1P15918 1043 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 KCNQ1P51787 676 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 JAG1P78504 1218 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 TFF2Q03403 129 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 ZGPATQ8N5A5 531 aaKnown RBP9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 GNL3LQ9NVN8 582 aaKnown RBP9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 DENND2AQ9ULE3 1009 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 MYO9BQ13459 2157 aa9.48□□□□□ -0.89
NPIPB4-215ENST00000542133 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 GBF1Q92538 1859 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 GPR75-ASB3A0A0A6YYF3 556 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 FAM205CA6NFA0 338 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 GRXCR1A8MXD5 290 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 EYA2O00167 538 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 STK25O00506 426 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 SEPT4O43236 478 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 PQBP1O60828 265 aaKnown RBP9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 ASNSP08243 561 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 IGFBP4P22692 258 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 PHKA1P46020 1223 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 CCNA1P78396 465 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 LRRC41Q15345 812 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 FAM47AQ5JRC9 791 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 WDR78Q5VTH9 848 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms