RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 DNAJA1P31689 397 aaKnown RBP5.1□□□□□ -1.59
USP28-210ENST00000542033 IKZF1Q13422 519 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 NAALADL2Q58DX5 795 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 CDKAL1Q5VV42 579 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 CDCP2Q5VXM1 449 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 ZNF574Q6ZN55 896 aaPredicted RBP5.1□□□□□ -1.59
USP28-210ENST00000542033 SPRED2Q7Z698 418 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 BAHD1Q8TBE0 780 aaPredicted RBP5.1□□□□□ -1.59
USP28-210ENST00000542033 RNF141Q8WVD5 230 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.1□□□□□ -1.59
USP28-210ENST00000542033 ASPNQ9BXN1 380 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 PITPNM2Q9BZ72 1349 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 TRIT1Q9H3H1 467 aaKnown RBP5.1□□□□□ -1.59
USP28-210ENST00000542033 CNNM2Q9H8M5 875 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 PRR33A8MZF0 331 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 H3BS24 57 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 RGS13O14921 159 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 NME1P15531 152 aaKnown RBP5.09□□□□□ -1.59
USP28-210ENST00000542033 CCNFP41002 786 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 RNF4P78317 190 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 NFXL1Q6ZNB6 911 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 SLC43A3Q8NBI5 491 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 RBBP8NLQ8NC74 664 aaPredicted RBP5.09□□□□□ -1.59
USP28-210ENST00000542033 OR6P1Q8NGX9 317 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 PI4K2BQ8TCG2 481 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 PPP1R13LQ8WUF5 828 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 HSPA12BQ96MM6 686 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 TM9SF2Q99805 663 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP28-210ENST00000542033 LMCD1Q9NZU5 365 aa5.09□□□□□ -1.59
USP28-210ENST00000542033 BIN1O00499 593 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 POLR2BP30876 1174 aaKnown RBP5.08□□□□□ -1.6
USP28-210ENST00000542033 GIPRP48546 466 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 TNK2Q07912 1038 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 ZNF792Q3KQV3 632 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 MCTP1Q6DN14 999 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 SLC23A3Q6PIS1 610 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 LSRQ86X29 649 aaPredicted RBP5.08□□□□□ -1.6
USP28-210ENST00000542033 ANAPC16Q96DE5 110 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 KREMEN1Q96MU8 473 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 C8orf37Q96NL8 207 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 GOLGA2P5Q9HBQ8 144 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 GPATCH2Q9NW75 528 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 ADGRE2Q9UHX3 823 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 ST14Q9Y5Y6 855 aa5.08□□□□□ -1.6
USP28-210ENST00000542033 COL17A1Q9UMD9 1497 aaPredicted RBP5.07□□□□□ -1.6
USP28-210ENST00000542033 CNTNAP4Q9C0A0 1308 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 FAM86C2PA6NEL3 165 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 TNFRSF10CO14798 259 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 CLEC3AO75596 197 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 GUCY2CP25092 1073 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 CD96P40200 585 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 ZP2Q05996 745 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 INTS3Q68E01 1043 aaKnown RBP5.07□□□□□ -1.6
USP28-210ENST00000542033 TMPRSS7Q7RTY8 843 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 WFDC3Q8IUB2 231 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 DTWD2Q8NBA8 298 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 CCDC120Q96HB5 630 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 DHRS1Q96LJ7 313 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 SLC9A7Q96T83 725 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 ASCC2Q9H1I8 757 aaPredicted RBP5.07□□□□□ -1.6
USP28-210ENST00000542033 SEMA3GQ9NS98 782 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 ZSWIM5Q9P217 1185 aa5.07□□□□□ -1.6
USP28-210ENST00000542033 UBOX5O94941 541 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 TAL1P17542 331 aaPredicted RBP5.06□□□□□ -1.6
USP28-210ENST00000542033 PPP2R5EQ16537 467 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 RUFY4Q6ZNE9 571 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 CBLL1Q75N03 491 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 TAB3Q8N5C8 712 aaPredicted RBP5.06□□□□□ -1.6
USP28-210ENST00000542033 UBE2FQ969M7 185 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 SHDQ96IW2 340 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 Q96M66 194 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 GPR62Q9BZJ7 368 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 RC3H2Q9HBD1 1191 aaKnown RBP5.06□□□□□ -1.6
USP28-210ENST00000542033 ATP13A1Q9HD20 1204 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 SLC12A7Q9Y666 1083 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 MRVI1Q9Y6F6 885 aa5.06□□□□□ -1.6
USP28-210ENST00000542033 PAX4O43316 350 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 RNASE1P07998 156 aaKnown RBP5.05□□□□□ -1.6
USP28-210ENST00000542033 FGRP09769 529 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 JUNBP17275 347 aaPredicted RBP5.05□□□□□ -1.6
USP28-210ENST00000542033 TPP2P29144 1249 aaPredicted RBP5.05□□□□□ -1.6
USP28-210ENST00000542033 CLEC16AQ2KHT3 1053 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 MCF2L2Q86YR7 1114 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 SLC6A18Q96N87 628 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 GMLQ99445 158 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 TANGO6Q9C0B7 1094 aa5.05□□□□□ -1.6
USP28-210ENST00000542033 MKRN2Q9H000 416 aaKnown RBP5.05□□□□□ -1.6
USP28-210ENST00000542033 CARS2Q9HA77 564 aaKnown RBP5.05□□□□□ -1.6
USP28-210ENST00000542033 ACRP10323 421 aa5.04□□□□□ -1.6
USP28-210ENST00000542033 TNNI3KQ59H18 835 aa5.04□□□□□ -1.6
USP28-210ENST00000542033 UNC5AQ6ZN44 842 aa5.04□□□□□ -1.6
USP28-210ENST00000542033 ATG4DQ86TL0 474 aaPredicted RBP5.04□□□□□ -1.6
USP28-210ENST00000542033 TTC6Q86TZ1 520 aa5.04□□□□□ -1.6
USP28-210ENST00000542033 TSPYL5Q86VY4 417 aaPredicted RBP5.04□□□□□ -1.6
USP28-210ENST00000542033 TMEM192Q8IY95 271 aa5.04□□□□□ -1.6
USP28-210ENST00000542033 C19orf47Q8N9M1 422 aaKnown RBP5.04□□□□□ -1.6
USP28-210ENST00000542033 ENOX1Q8TC92 643 aaKnown RBP5.04□□□□□ -1.6
USP28-210ENST00000542033 SYTL4Q96C24 671 aaPredicted RBP5.04□□□□□ -1.6
USP28-210ENST00000542033 ASIC4Q96FT7 647 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms