RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 ISY1Q9ULR0 285 aaKnown RBP4.94□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 AKAP2Q9Y2D5 859 aa4.94□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 UNC13AQ9UPW8 1703 aa4.94□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 DCAF1Q9Y4B6 1507 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ANKRD33BA6NCL7 494 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 LRRC10BA6NIK2 292 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 FGAP02671 866 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 LDHCP07864 332 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ATICP31939 592 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CD96P40200 585 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 TERF1P54274 439 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 OXCT1P55809 520 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SATB1Q01826 763 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PSMD2Q13200 908 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 BMS1Q14692 1282 aaKnown RBP4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CCSAPQ6IQ19 270 aaPredicted RBP4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CC2D1AQ6P1N0 951 aaPredicted RBP4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 RPUSD2Q8IZ73 545 aaKnown RBP4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 VPS37AQ8NEZ2 397 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 FLAD1Q8NFF5 587 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PPM1EQ8WY54 764 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 JDP2Q8WYK2 163 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 C8orf48Q96LL4 319 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CFAP53Q96M91 514 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 FAM210AQ96ND0 272 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CEP89Q96ST8 783 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 EHD4Q9H223 541 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 RETREG1Q9H6L5 497 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ODF2LQ9ULJ1 636 aa4.93□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PLIN1O60240 522 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 LDHAP00338 332 aaKnown RBP4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 VIL1P09327 827 aaKnown RBP4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 NFE2L2Q16236 605 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 KIF4BQ2VIQ3 1234 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 RGL3Q3MIN7 710 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 MAP9Q49MG5 647 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 HSP90B2PQ58FF3 399 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 RPS26P11Q5JNZ5 115 aaPredicted RBP4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SOGA3Q5TF21 947 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ZNF746Q6NUN9 644 aaPredicted RBP4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ZSWIM9Q86XI8 627 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 HSCBQ8IWL3 235 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PMFBP1Q8TBY8 1022 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 TOX2Q96NM4 488 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CCDC86Q9H6F5 360 aaKnown RBP4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 KRT82Q9NSB4 513 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 NLRP2Q9NX02 1062 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PCOLCE2Q9UKZ9 415 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SMC3Q9UQE7 1217 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SNX11Q9Y5W9 270 aa4.92□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 GOLGA6L6A8MZA4 724 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 IFRD1O00458 451 aaPredicted RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 NPHP1O15259 732 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 RNGTTO60942 597 aaKnown RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 DNAJC6O75061 913 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 HIP1RO75146 1068 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CASQ1P31415 396 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SLC20A2Q08357 652 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 KIAA2012Q0VF49 1180 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ENOX2Q16206 610 aaKnown RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 LARP1BQ659C4 914 aaKnown RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ANKRD13BQ86YJ7 626 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CILP2Q8IUL8 1156 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PRPF38AQ8NAV1 312 aaKnown RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SLC43A3Q8NBI5 491 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 STAG1Q8WVM7 1258 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 ITFG2Q969R8 447 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 CCDC47Q96A33 483 aaKnown RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 WDR89Q96FK6 387 aaPredicted RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 DUSP23Q9BVJ7 150 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 TNKS2Q9H2K2 1166 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 SUDS3Q9H7L9 328 aaPredicted RBP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 DISC1Q9NRI5 854 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PLAGL2Q9UPG8 496 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 U3KQE9 123 aa4.91□□□□□ -1.62
CACNA1C-IT2-201ENST00000541871 PABPN1LA6NDY0 278 aaKnown RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 SCAMP3O14828 347 aaKnown RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 ZNF862O60290 1169 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 LEFTY1O75610 366 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 FOSP01100 380 aaPredicted RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 RAP1GAPP47736 663 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 HMGN5P82970 282 aaKnown RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 TTLL4Q14679 1199 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 VPS72Q15906 364 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 KCNMB1Q16558 191 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 C9orf131Q5VYM1 1079 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 USPL1Q5W0Q7 1092 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 PRPF40BQ6NWY9 871 aaKnown RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 LMNTD2Q8IXW0 634 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 CCDC89Q8N998 374 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 ZSCAN18Q8TBC5 510 aaPredicted RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 ASB11Q8WXH4 323 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 PPP1R16BQ96T49 567 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 LRRC27Q9C0I9 530 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 CXorf56Q9H5V9 222 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 PCDHGC5Q9Y5F6 944 aa4.9□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 ZCCHC6Q5VYS8 1495 aaKnown RBP4.89□□□□□ -1.63
CACNA1C-IT2-201ENST00000541871 ZNF503-AS2A6NEH8 195 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms