RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
CLSTN3-212ENST00000541770 SEMA6BQ9H3T3 888 aa10.51□□□□□ -0.73
CLSTN3-212ENST00000541770 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
CLSTN3-212ENST00000541770 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
CLSTN3-212ENST00000541770 SLC15A5A6NIM6 579 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 KBTBD13C9JR72 458 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 DNM1LO00429 736 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 CNMDO75829 334 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 FOSL2P15408 326 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 DPP9Q86TI2 863 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 BADQ92934 168 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 ECHDC1Q9NTX5 307 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 GINM1Q9NU53 330 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 TTC41PQ6P2S7 1318 aa10.5□□□□□ -0.73
CLSTN3-212ENST00000541770 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 ZAP70P43403 619 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 USP5P45974 858 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 DYNLL1P63167 89 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 TRIM60Q495X7 471 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 B4GALNT3Q6L9W6 998 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 SLC39A5Q6ZMH5 540 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 ADGRA1Q86SQ6 560 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 ARRDC4Q8NCT1 418 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 FERMT2Q96AC1 680 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 PRDM6Q9NQX0 595 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 UNC80Q8N2C7 3258 aa10.49□□□□□ -0.73
CLSTN3-212ENST00000541770 ERC2O15083 957 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 MX1P20591 662 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 USP14P54578 494 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 TTF1Q15361 905 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 TMED8Q6PL24 325 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 CATSPERGQ6ZRH7 1159 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 SYMPKQ92797 1274 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 HAUS7Q99871 368 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 BCL11AQ9H165 835 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
CLSTN3-212ENST00000541770 MYH8P13535 1937 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 ZNFX1Q9P2E3 1918 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 CYBAP13498 195 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 VCAM1P19320 739 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 CYP7A1P22680 504 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 ADCYAP1R1P41586 468 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 PDE1AP54750 535 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 PPP4CP60510 307 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 GRB14Q14449 540 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 ABCB5Q2M3G0 1257 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 METTL16Q86W50 562 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 MIGA1Q8NAN2 632 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 PI4K2BQ8TCG2 481 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 OTUD7AQ8TE49 926 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 CCDC136Q96JN2 1154 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 C12orf42Q96LP6 360 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 TTYH1Q9H313 450 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 BOLA2Q9H3K6 86 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 OSBPL3Q9H4L5 887 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 RPAP3Q9H6T3 665 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 CABP5Q9NP86 173 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 PPP4R2Q9NY27 417 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
CLSTN3-212ENST00000541770 SPDYE16A6NNV3 312 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 ADORA2AP29274 412 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 SMAD3P84022 425 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 PLS1Q14651 629 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 ACER1Q8TDN7 264 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 PIH1D3Q9NQM4 214 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 PDLIM7Q9NR12 457 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 PAG1Q9NWQ8 432 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 SERPINB13Q9UIV8 391 aa10.46□□□□□ -0.73
CLSTN3-212ENST00000541770 PLXNA1Q9UIW2 1896 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 ZNF236Q9UL36 1845 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 GOLIM4O00461 696 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 MPHOSPH10O00566 681 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 SEPT4O43236 478 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 IDH1O75874 414 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 HOXC6P09630 235 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 MAP3K12Q12852 859 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 TSHZ3Q63HK5 1081 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 PPM1EQ8WY54 764 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 MOV10L1Q9BXT6 1211 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 TANGO6Q9C0B7 1094 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 A0A0C4DFX4 3053 aa10.45□□□□□ -0.74
CLSTN3-212ENST00000541770 COL11A1P12107 1806 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-212ENST00000541770 RAG1P15918 1043 aa10.44□□□□□ -0.74
CLSTN3-212ENST00000541770 ERCC3P19447 782 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms