RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 B4E1Z4 1266 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 ERLIN2O94905 339 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 ZAP70P43403 619 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 USP14P54578 494 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 TUBB2AQ13885 445 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 CCDC82Q8N4S0 544 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 TUBB2BQ9BVA1 445 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.28
AC005840.4-201ENST00000541242 ADAMTS2O95450 1211 aa16.77■□□□□ 0.27
AC005840.4-201ENST00000541242 STIM1Q13586 685 aa16.77■□□□□ 0.27
AC005840.4-201ENST00000541242 NTRK3Q16288 839 aa16.77■□□□□ 0.27
AC005840.4-201ENST00000541242 CHP1Q99653 195 aa16.77■□□□□ 0.27
AC005840.4-201ENST00000541242 NUP98P52948 1817 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 A0A087X0B3 334 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 AGPSO00116 658 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 GPAA1O43292 621 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 CTSWP56202 376 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 SPATA1Q5VX52 437 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 PTPREP23469 700 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 NR5A1Q13285 461 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 CNGA4Q8IV77 575 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 CMTR1Q8N1G2 835 aaKnown RBP16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 STAMQ92783 540 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 VPS16Q9H269 839 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 ABHD10Q9NUJ1 306 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 FAM169AQ9Y6X4 670 aa16.76■□□□□ 0.27
AC005840.4-201ENST00000541242 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 ATP1A1P05023 1023 aaKnown RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 DPYDQ12882 1025 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 COG1Q8WTW3 980 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 CSRNP2Q9H175 543 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 VIPAS39Q9H9C1 493 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 GOLGA8AA7E2F4 631 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 CDKL5O76039 1030 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 TUBB4BP68371 445 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 CUL4BQ13620 913 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 KCNV1Q6PIU1 500 aa16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 DIS3L2Q8IYB7 885 aaKnown RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 REXO2Q9Y3B8 237 aaKnown RBP16.75■□□□□ 0.27
AC005840.4-201ENST00000541242 ANKRD36CQ5JPF3 1778 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 A0A0G2JS52 829 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 ZBTB43O43298 467 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 HNRNPH1P31943 449 aaKnown RBP16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 IRAK1P51617 712 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 MNAT1P51948 309 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 CDKAL1Q5VV42 579 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 TRIML1Q8N9V2 468 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 ACSBG1Q96GR2 724 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 EPSTI1Q96J88 318 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 SAMM50Q9Y512 469 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 SLIT2O94813 1529 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 MYH7P12883 1935 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 DOT1LQ8TEK3 1739 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 CPLX2Q6PUV4 134 aaKnown RBP16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 TRAPPC11Q7Z392 1133 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 TICAM2Q86XR7 235 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 VGLL2Q8N8G2 317 aa16.74■□□□□ 0.27
AC005840.4-201ENST00000541242 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 ANKRD18BA2A2Z9 1011 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 APPP05067 770 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 MCAMP43121 646 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 FILIP1LQ4L180 1135 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 FAM76AQ8TAV0 307 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 SPATA20Q8TB22 786 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 CRACR2AQ9BSW2 395 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 SELENOOQ9BVL4 669 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 CNNM1Q9NRU3 951 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 CTNND2Q9UQB3 1225 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 MYH3P11055 1940 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 GOLGA6CA6NDK9 693 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 N4BP3O15049 544 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 ZNF185O15231 689 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 GOLGA6DP0CG33 693 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 MMP14P50281 582 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 KRT31Q15323 416 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 ELOA2Q8IYF1 753 aaPredicted RBP16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 ZNF34Q8IZ26 560 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 BCAS4Q8TDM0 211 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 OXER1Q8TDS5 423 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 APPBP2Q92624 585 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 GOLGA6AQ9NYA3 693 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms