RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 PBX2P40425 430 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 BACE1P56817 501 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 CCNA1P78396 465 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 FOXK2Q01167 660 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 LRRC24Q50LG9 513 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 RASIP1Q5U651 963 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 WDR18Q9BV38 432 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 TMEM39AQ9NV64 488 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 COG5Q9UP83 839 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 RLFQ13129 1914 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 FAM86C2PA6NEL3 165 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 C19orf81C9J6K1 198 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 TLL1O43897 1013 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 PEX10O60683 326 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 IGHA2P01877 340 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 GNAI3P08754 354 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 CYBAP13498 195 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 PTPREP23469 700 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 CAP2P40123 477 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 NHLH1Q02575 133 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 METTL24Q5JXM2 366 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 C20orf194Q5TEA3 1177 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 TRPV1Q8NER1 839 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 TOX2Q96NM4 488 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 SLC28A3Q9HAS3 691 aa10.9□□□□□ -0.66
TRAPPC1-202ENST00000540486 DOCK1Q14185 1865 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 SEPT4O43236 478 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 SLURP2P0DP57 97 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 PRDX5P30044 214 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 CYP2C19P33261 490 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 LRRC41Q15345 812 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 SKIV2LQ15477 1246 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 ITPRIPQ8IWB1 547 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 FTSJ3Q8IY81 847 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 VGLL2Q8N8G2 317 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 FERMT2Q96AC1 680 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 PHF24Q9UPV7 400 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 HDAC5Q9UQL6 1122 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
TRAPPC1-202ENST00000540486 LOC285556D6RIA3 1793 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 GRXCR1A8MXD5 290 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 TIMP1P01033 207 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 GNAI2P04899 355 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 PPIGQ13427 754 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 MTX1Q13505 466 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 MTMR2Q13614 643 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 DSG2Q14126 1118 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 TMEM240Q5SV17 173 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 OLFML2BQ68BL8 750 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 ATG9AQ7Z3C6 839 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 FRMPD3Q5JV73 1810 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 RFX7Q2KHR2 1363 aa10.88□□□□□ -0.67
TRAPPC1-202ENST00000540486 CHD9Q3L8U1 2897 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 GAKO14976 1311 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 SALL1Q9NSC2 1324 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 PNMA6EA0A0J9YXQ4 647 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 EYA2O00167 538 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 FGFR2P21802 821 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 ATP8B2P98198 1209 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 FAAP100Q0VG06 881 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 GRB14Q14449 540 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 PUM3Q15397 648 aaKnown RBP10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 MFSD5Q6N075 450 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 ANKRD33Q7Z3H0 272 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 NPLOC4Q8TAT6 608 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 KHSRPQ92945 711 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 FAM163AQ96GL9 167 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 PA2G4Q9UQ80 394 aaKnown RBP10.87□□□□□ -0.67
TRAPPC1-202ENST00000540486 DOCK2Q92608 1830 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 SNPHO15079 494 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 SRGAP3O43295 1099 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 PQBP1O60828 265 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 ASNSP08243 561 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 MS4A1P11836 297 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 PICALMQ13492 652 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 MVPQ14764 893 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 WDR78Q5VTH9 848 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 PSRC1Q6PGN9 363 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 ZGPATQ8N5A5 531 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 FBXL18Q96ME1 805 aa10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 NKX2-4Q9H2Z4 354 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms