RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 GOPCQ9HD26 462 aa17.59■□□□□ 0.41
MDM1-210ENST00000540418 STX8Q9UNK0 236 aa17.59■□□□□ 0.41
MDM1-210ENST00000540418 CFHR5Q9BXR6 569 aa17.59■□□□□ 0.41
MDM1-210ENST00000540418 HOXA7P31268 230 aaPredicted RBP17.58■□□□□ 0.41
MDM1-210ENST00000540418 RASEFQ8IZ41 740 aa17.58■□□□□ 0.41
MDM1-210ENST00000540418 ZKSCAN3Q9BRR0 538 aa17.58■□□□□ 0.41
MDM1-210ENST00000540418 PCNTO95613 3336 aa17.58■□□□□ 0.4
MDM1-210ENST00000540418 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
MDM1-210ENST00000540418 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
MDM1-210ENST00000540418 TAF1CQ15572 869 aaPredicted RBP17.58■□□□□ 0.4
MDM1-210ENST00000540418 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
MDM1-210ENST00000540418 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
MDM1-210ENST00000540418 CYB5R4Q7L1T6 521 aa17.58■□□□□ 0.4
MDM1-210ENST00000540418 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.4
MDM1-210ENST00000540418 ZFYVE28Q9HCC9 887 aa17.58■□□□□ 0.4
MDM1-210ENST00000540418 TBC1D8O95759 1140 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 VCAM1P19320 739 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 KRT32Q14532 448 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 DGKHQ86XP1 1220 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 F5H6K3 240 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 OSBPP22059 807 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 KLRC3Q07444 240 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 UBAC1Q9BSL1 405 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
MDM1-210ENST00000540418 USP17L15C9J2P7 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L13C9JLJ4 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L11C9JVI0 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L18D6R9N7 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L22D6RA61 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L17D6RBQ6 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L19D6RCP7 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L20D6RJB6 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
MDM1-210ENST00000540418 USP17L24Q0WX57 530 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 CRHR2Q13324 411 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
MDM1-210ENST00000540418 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
MDM1-210ENST00000540418 GMCL1P1Q8NEA9 526 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 ANKS1AQ92625 1134 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 PARK7Q99497 189 aaKnown RBP17.56■□□□□ 0.4
MDM1-210ENST00000540418 PTPRFP10586 1907 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 RAD21O60216 631 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 MCCP23508 829 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
MDM1-210ENST00000540418 RPAP3Q9H6T3 665 aaPredicted RBP17.56■□□□□ 0.4
MDM1-210ENST00000540418 FOXN1O15353 648 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 SEC24BO95487 1268 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 CATSPERGQ6ZRH7 1159 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 NEK1Q96PY6 1258 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 ASCC2Q9H1I8 757 aaPredicted RBP17.55■□□□□ 0.4
MDM1-210ENST00000540418 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 WDR46O15213 610 aaKnown RBP17.55■□□□□ 0.4
MDM1-210ENST00000540418 NDUFB10O96000 172 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 CYP2C8P10632 490 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 MCM5P33992 734 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
MDM1-210ENST00000540418 R3HDMLQ9H3Y0 253 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 TNKSO95271 1327 aa17.55■□□□□ 0.4
MDM1-210ENST00000540418 TLR2O60603 784 aa17.54■□□□□ 0.4
MDM1-210ENST00000540418 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
MDM1-210ENST00000540418 IFIT3O14879 490 aaKnown RBP17.54■□□□□ 0.4
MDM1-210ENST00000540418 SART3Q15020 963 aaKnown RBP17.54■□□□□ 0.4
MDM1-210ENST00000540418 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
MDM1-210ENST00000540418 SLFN13Q68D06 897 aa17.54■□□□□ 0.4
MDM1-210ENST00000540418 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
MDM1-210ENST00000540418 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
MDM1-210ENST00000540418 TSKSQ9UJT2 592 aa17.54■□□□□ 0.4
MDM1-210ENST00000540418 ERICH2A1L162 156 aa17.53■□□□□ 0.4
MDM1-210ENST00000540418 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
MDM1-210ENST00000540418 ANTXR2P58335 489 aa17.53■□□□□ 0.4
MDM1-210ENST00000540418 SEC23AQ15436 765 aa17.53■□□□□ 0.4
MDM1-210ENST00000540418 P2RX7Q99572 595 aaKnown RBP17.53■□□□□ 0.4
MDM1-210ENST00000540418 PRC1O43663 620 aa17.53■□□□□ 0.4
MDM1-210ENST00000540418 HMGB1P09429 215 aaKnown RBP17.53■□□□□ 0.4
MDM1-210ENST00000540418 SMCR8Q8TEV9 937 aaPredicted RBP17.53■□□□□ 0.4
MDM1-210ENST00000540418 GMCL1Q96IK5 515 aa17.53■□□□□ 0.4
MDM1-210ENST00000540418 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
MDM1-210ENST00000540418 COG2Q14746 738 aa17.52■□□□□ 0.4
MDM1-210ENST00000540418 NOM1Q5C9Z4 860 aaKnown RBP17.52■□□□□ 0.4
MDM1-210ENST00000540418 FAM83BQ5T0W9 1011 aa17.52■□□□□ 0.4
MDM1-210ENST00000540418 IFIT1BQ5T764 474 aaKnown RBP17.52■□□□□ 0.4
MDM1-210ENST00000540418 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.4
MDM1-210ENST00000540418 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
MDM1-210ENST00000540418 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
MDM1-210ENST00000540418 HSPA8P11142 646 aaKnown RBP17.52■□□□□ 0.39
MDM1-210ENST00000540418 TMEM87BQ96K49 555 aa17.52■□□□□ 0.39
MDM1-210ENST00000540418 NUP88Q99567 741 aaPredicted RBP17.52■□□□□ 0.39
MDM1-210ENST00000540418 GPR25O00155 361 aa17.51■□□□□ 0.39
MDM1-210ENST00000540418 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
MDM1-210ENST00000540418 TMEM67Q5HYA8 995 aa17.51■□□□□ 0.39
MDM1-210ENST00000540418 C17orf99Q6UX52 265 aa17.51■□□□□ 0.39
MDM1-210ENST00000540418 DHX32Q7L7V1 743 aaKnown RBP17.51■□□□□ 0.39
MDM1-210ENST00000540418 JAKMIP1Q96N16 626 aaKnown RBP17.51■□□□□ 0.39
MDM1-210ENST00000540418 ADGRA2Q96PE1 1338 aa17.51■□□□□ 0.39
MDM1-210ENST00000540418 BMP3P12645 472 aa17.51■□□□□ 0.39
MDM1-210ENST00000540418 PSMA5P28066 241 aa17.51■□□□□ 0.39
MDM1-210ENST00000540418 SLC1A4P43007 532 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms