RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 IRF6O14896 467 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 ECE1P42892 770 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 BACE1P56817 501 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 DEFB115Q30KQ5 88 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 SPRYD7Q5W111 196 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 FBXL16Q8N461 479 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 KIAA1683Q9H0B3 1180 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 LY9Q9HBG7 655 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 GOPCQ9HD26 462 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 MTMR2Q13614 643 aa18.07■□□□□ 0.48
DDB1-216ENST00000539739 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
DDB1-216ENST00000539739 RASAL3Q86YV0 1011 aa18.07■□□□□ 0.48
DDB1-216ENST00000539739 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
DDB1-216ENST00000539739 KCNH4Q9UQ05 1017 aa18.07■□□□□ 0.48
DDB1-216ENST00000539739 RASSF10A6NK89 507 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 RAD21O60216 631 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 ST18O60284 1047 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 SLC10A3P09131 477 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 GJA5P36382 358 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 GTF2A2P52657 109 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 SNAPC2Q13487 334 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 ZYXQ15942 572 aaKnown RBP18.06■□□□□ 0.48
DDB1-216ENST00000539739 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 CATIPQ7Z7H3 387 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 LRRC47Q8N1G4 583 aaKnown RBP18.06■□□□□ 0.48
DDB1-216ENST00000539739 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 BRF1Q92994 677 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
DDB1-216ENST00000539739 TMOD4Q9NZQ9 345 aa18.06■□□□□ 0.48
DDB1-216ENST00000539739 MKRN3Q13064 507 aaKnown RBP18.05■□□□□ 0.48
DDB1-216ENST00000539739 SGMS1Q86VZ5 419 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 VCPKMTQ9H867 229 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 F5H6K3 240 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 HMGCS2P54868 508 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 KLRC3Q07444 240 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 SH3D19Q5HYK7 790 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 LPAR1Q92633 364 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 SENP2Q9HC62 589 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 SLC12A7Q9Y666 1083 aa18.05■□□□□ 0.48
DDB1-216ENST00000539739 A0A0G2JLL6 359 aaPredicted RBP18.04■□□□□ 0.48
DDB1-216ENST00000539739 CETPP11597 493 aa18.04■□□□□ 0.48
DDB1-216ENST00000539739 HSPA6P17066 643 aa18.04■□□□□ 0.48
DDB1-216ENST00000539739 TOB2Q14106 344 aaPredicted RBP18.04■□□□□ 0.48
DDB1-216ENST00000539739 FASTKD5Q7L8L6 764 aaKnown RBP18.04■□□□□ 0.48
DDB1-216ENST00000539739 PRRT2Q7Z6L0 340 aaPredicted RBP18.04■□□□□ 0.48
DDB1-216ENST00000539739 NAP1L2Q9ULW6 460 aaPredicted RBP18.04■□□□□ 0.48
DDB1-216ENST00000539739 MTMR7Q9Y216 660 aa18.04■□□□□ 0.48
DDB1-216ENST00000539739 AK2P54819 239 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 APOBRQ0VD83 1088 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 GRM1Q13255 1194 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 CYP4F22Q6NT55 531 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 EMILIN3Q9NT22 766 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 PHIPQ8WWQ0 1821 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 MYH4Q9Y623 1939 aa18.03■□□□□ 0.48
DDB1-216ENST00000539739 KLF18A0A0U1RQI7 1052 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 MANSC4A6NHS7 340 aaPredicted RBP18.02■□□□□ 0.48
DDB1-216ENST00000539739 DDAH1O94760 285 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 NDUFB10O96000 172 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 CALM1P0DP23 149 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 CALM2P0DP24 149 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 CALM3P0DP25 149 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 SLC1A4P43007 532 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 GADL1Q6ZQY3 521 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 SPICE1Q8N0Z3 855 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 PROCA1Q8NCQ7 364 aaPredicted RBP18.02■□□□□ 0.48
DDB1-216ENST00000539739 CAPNS2Q96L46 248 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
DDB1-216ENST00000539739 CCL15-CCL14A0A0B4J2E2 113 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 FAM155AB1AL88 458 aaPredicted RBP18.01■□□□□ 0.47
DDB1-216ENST00000539739 NOGQ13253 232 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 CCL15Q16663 113 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 APOA5Q6Q788 366 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 NUP133Q8WUM0 1156 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 DCAF4Q8WV16 495 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 GMCL1Q96IK5 515 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 MS4A4AQ96JQ5 239 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 ISY1Q9ULR0 285 aaKnown RBP18.01■□□□□ 0.47
DDB1-216ENST00000539739 WDR46O15213 610 aaKnown RBP18.01■□□□□ 0.47
DDB1-216ENST00000539739 ZBTB43O43298 467 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 INHBEP58166 350 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 MAP3K14Q99558 947 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
DDB1-216ENST00000539739 PDHBP11177 359 aa18■□□□□ 0.47
DDB1-216ENST00000539739 BMP3P12645 472 aa18■□□□□ 0.47
DDB1-216ENST00000539739 VCAM1P19320 739 aa18■□□□□ 0.47
DDB1-216ENST00000539739 MCM2P49736 904 aa18■□□□□ 0.47
DDB1-216ENST00000539739 RCAN1P53805 252 aa18■□□□□ 0.47
DDB1-216ENST00000539739 EVCP57679 992 aa18■□□□□ 0.47
DDB1-216ENST00000539739 HTRA3P83110 453 aa18■□□□□ 0.47
DDB1-216ENST00000539739 TROAPQ12815 778 aa18■□□□□ 0.47
DDB1-216ENST00000539739 CCDC96Q2M329 555 aa18■□□□□ 0.47
DDB1-216ENST00000539739 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
DDB1-216ENST00000539739 MICU3Q86XE3 530 aa18■□□□□ 0.47
DDB1-216ENST00000539739 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
DDB1-216ENST00000539739 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms