RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PARP14Q460N5 1801 aa15□□□□□ -0.01
TSPAN9-207ENST00000539631 CA12O43570 354 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 VCAM1P19320 739 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 NOVP48745 357 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 NT5C2P49902 561 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 CRHR2Q13324 411 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 USP26Q9BXU7 913 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 STX8Q9UNK0 236 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
TSPAN9-207ENST00000539631 RLFQ13129 1914 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 RAD21O60216 631 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 CYP2C8P10632 490 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 HSPA8P11142 646 aaKnown RBP14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 HSPA4P34932 840 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 PABPC4Q13310 644 aaKnown RBP eCLIP14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 C8orf34Q49A92 452 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 PPP4R3BQ5MIZ7 849 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 RCSD1Q6JBY9 416 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 RALYLQ86SE5 291 aaKnown RBP14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 SPICE1Q8N0Z3 855 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 CFHR5Q9BXR6 569 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 RPAP3Q9H6T3 665 aaPredicted RBP14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 ZFYVE28Q9HCC9 887 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 GOPCQ9HD26 462 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 PCNTO95613 3336 aa14.98□□□□□ -0.01
TSPAN9-207ENST00000539631 F5H6K3 240 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 EPB41L2O43491 1005 aaKnown RBP14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 SEC24BO95487 1268 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 NDUFB10O96000 172 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 OSBPP22059 807 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 HOXA7P31268 230 aaPredicted RBP14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 KLRC3Q07444 240 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 CHST3Q7LGC8 479 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 IQCA1Q86XH1 822 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 MB21D2Q8IYB1 491 aaPredicted RBP14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 LPAR1Q92633 364 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 KCNB2Q92953 911 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 ZSCAN10Q96SZ4 725 aaPredicted RBP14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 TMEM47Q9BQJ4 181 aa14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 ASCC2Q9H1I8 757 aaPredicted RBP14.97□□□□□ -0.01
TSPAN9-207ENST00000539631 TNKSO95271 1327 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L15C9J2P7 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L13C9JLJ4 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L11C9JVI0 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L18D6R9N7 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L22D6RA61 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L17D6RBQ6 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L19D6RCP7 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L20D6RJB6 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 WDR46O15213 610 aaKnown RBP14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 TOP1P11387 765 aaKnown RBP14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 ZKSCAN1P17029 563 aaPredicted RBP14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 CTCFP49711 727 aaPredicted RBP14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 ANTXR2P58335 489 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 USP17L24Q0WX57 530 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 ADCK5Q3MIX3 580 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 TSGA10IPQ3SY00 556 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 CCDC178Q5BJE1 867 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 SLFN13Q68D06 897 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 TTC14Q96N46 770 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 PARK7Q99497 189 aaKnown RBP14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 UBAC1Q9BSL1 405 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 PNMA3Q9UL41 463 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 SYNPO2Q9UMS6 1093 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 SNX14Q9Y5W7 946 aa14.96□□□□□ -0.01
TSPAN9-207ENST00000539631 ADGRA2Q96PE1 1338 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 COL11A1P12107 1806 aaPredicted RBP14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 TLR2O60603 784 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 LBX1P52954 281 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 IRX3P78415 501 aaPredicted RBP14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 SEC23AQ15436 765 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 FAM83BQ5T0W9 1011 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 RASGRP2Q7LDG7 609 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 DGKHQ86XP1 1220 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 ENAHQ8N8S7 591 aaPredicted RBP14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 GMCL1P1Q8NEA9 526 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 NEK1Q96PY6 1258 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 P2RX7Q99572 595 aaKnown RBP14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 CPA4Q9UI42 421 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 MTMR7Q9Y216 660 aa14.95□□□□□ -0.02
TSPAN9-207ENST00000539631 CASP8AP2Q9UKL3 1982 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 ZSWIM8A7E2V4 1837 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 GPR25O00155 361 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 PRC1O43663 620 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 KRT32Q14532 448 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 C17orf99Q6UX52 265 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 SMCR8Q8TEV9 937 aaPredicted RBP14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 ANKS1AQ92625 1134 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 MGAMO43451 1857 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 A0A0G2JMZ2 1700 aa14.94□□□□□ -0.02
TSPAN9-207ENST00000539631 EIF5BO60841 1220 aaKnown RBP14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 MCCP23508 829 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms