RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
DDB1-213ENST00000539332 TNFAIP1Q13829 316 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 RTN1Q16799 776 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 IFIT1BQ5T764 474 aaKnown RBP10.25□□□□□ -0.77
DDB1-213ENST00000539332 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 FANCBQ8NB91 859 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 FBXO18Q8NFZ0 1043 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 CSRNP1Q96S65 589 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 ADARB2Q9NS39 739 aaKnown RBP10.25□□□□□ -0.77
DDB1-213ENST00000539332 HACL1Q9UJ83 578 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 CNPY2Q9Y2B0 182 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 ZKSCAN5Q9Y2L8 839 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 TSPY2A6NKD2 308 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 H3BQV1 296 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 PRPF40AO75400 957 aaKnown RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 MBD3O95983 291 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 RXRAP19793 462 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 DNM1Q05193 864 aaKnown RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 FUT2Q10981 343 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 NBPF11Q86T75 865 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 FERMT3Q86UX7 667 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 DGKHQ86XP1 1220 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 TMEM39BQ9GZU3 492 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 IL17RBQ9NRM6 502 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 WDR90Q96KV7 1748 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 TNNI2P48788 182 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 KRT85P78386 507 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 TFAP4Q01664 338 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 RASA3Q14644 834 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 ZSCAN23Q3MJ62 389 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 FAM47AQ5JRC9 791 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 ANGEL2Q5VTE6 544 aaKnown RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 ATL3Q6DD88 541 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 CATIPQ7Z7H3 387 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 USP48Q86UV5 1035 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 FOXP4Q8IVH2 680 aaPredicted RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 ZNF444Q8N0Y2 327 aaPredicted RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 CRACR2BQ8N4Y2 399 aaPredicted RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 NEDD1Q8NHV4 660 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 DNAJC18Q9H819 358 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 RBM28Q9NW13 759 aaKnown RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 GGA3Q9NZ52 723 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 SWAP70Q9UH65 585 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 PGAP2Q9UHJ9 254 aa10.24□□□□□ -0.77
DDB1-213ENST00000539332 SCAF8Q9UPN6 1271 aaKnown RBP10.24□□□□□ -0.77
DDB1-213ENST00000539332 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 NMT2O60551 498 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 SLURP2P0DP57 97 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 SHMT1P34896 483 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 APOBEC3FQ8IUX4 373 aaKnown RBP10.23□□□□□ -0.77
DDB1-213ENST00000539332 PHKBQ93100 1093 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 C8orf76Q96K31 380 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
DDB1-213ENST00000539332 DEFB129Q9H1M3 183 aa10.23□□□□□ -0.77
DDB1-213ENST00000539332 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 ATAD5Q96QE3 1844 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 UQCRHLA0A096LP55 91 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 UQCRHP07919 91 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 TSPY3P0CV98 308 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 TSPY8P0CW00 308 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 EPHX2P34913 555 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
DDB1-213ENST00000539332 TMTC3Q6ZXV5 915 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 CCDC144CPQ8IYA2 1237 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 FAM177A1Q8N128 213 aaPredicted RBP10.22□□□□□ -0.77
DDB1-213ENST00000539332 WASF1Q92558 559 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 TEPSINQ96N21 525 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 SCAND2PQ9GZW5 306 aaPredicted RBP10.22□□□□□ -0.77
DDB1-213ENST00000539332 GDPD2Q9HCC8 539 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 HERC5Q9UII4 1024 aaKnown RBP10.22□□□□□ -0.77
DDB1-213ENST00000539332 R3HCC1Q9Y3T6 440 aaKnown RBP10.22□□□□□ -0.77
DDB1-213ENST00000539332 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
DDB1-213ENST00000539332 IGKV6D-41A0A0C4DH26 115 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 PPFIA3O75145 1194 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 DEXIO95424 95 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 NCLP19338 710 aaKnown RBP10.21□□□□□ -0.77
DDB1-213ENST00000539332 UBE2HP62256 183 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 KIF23Q02241 960 aaPredicted RBP10.21□□□□□ -0.77
DDB1-213ENST00000539332 FOXD4L6Q3SYB3 417 aaPredicted RBP10.21□□□□□ -0.77
DDB1-213ENST00000539332 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.77
DDB1-213ENST00000539332 FOXD4L3Q6VB84 417 aaPredicted RBP10.21□□□□□ -0.77
DDB1-213ENST00000539332 USP50Q70EL3 339 aaPredicted RBP10.21□□□□□ -0.77
DDB1-213ENST00000539332 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 ALG1Q9BT22 464 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 TRIM34Q9BYJ4 488 aa10.21□□□□□ -0.77
DDB1-213ENST00000539332 POTECB2RU33 542 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 PRPF3O43395 683 aaKnown RBP10.21□□□□□ -0.78
DDB1-213ENST00000539332 FIBPO43427 364 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 TBC1D12O60347 775 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 GADD45BO75293 160 aaPredicted RBP10.21□□□□□ -0.78
DDB1-213ENST00000539332 AKR1B1P15121 316 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms