RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 LRRFIP1Q32MZ4 808 aaKnown RBP26.63■■□□□ 1.85
SCARB1-206ENST00000539320 GIMAP6Q6P9H5 292 aa26.63■■□□□ 1.85
SCARB1-206ENST00000539320 TRMT44Q8IYL2 757 aaKnown RBP26.63■■□□□ 1.85
SCARB1-206ENST00000539320 PI4K2BQ8TCG2 481 aa26.63■■□□□ 1.85
SCARB1-206ENST00000539320 OTUD7AQ8TE49 926 aaPredicted RBP26.63■■□□□ 1.85
SCARB1-206ENST00000539320 LPAR1Q92633 364 aa26.63■■□□□ 1.85
SCARB1-206ENST00000539320 YTHDC1Q96MU7 727 aaKnown RBP26.63■■□□□ 1.85
SCARB1-206ENST00000539320 HMX1Q9NP08 348 aaPredicted RBP26.63■■□□□ 1.85
SCARB1-206ENST00000539320 BTBD7Q9P203 1132 aa26.63■■□□□ 1.85
SCARB1-206ENST00000539320 TMX2Q9Y320 296 aa26.63■■□□□ 1.85
SCARB1-206ENST00000539320 GPAA1O43292 621 aa26.62■■□□□ 1.85
SCARB1-206ENST00000539320 GLRX3O76003 335 aaKnown RBP26.62■■□□□ 1.85
SCARB1-206ENST00000539320 WDR78Q5VTH9 848 aa26.62■■□□□ 1.85
SCARB1-206ENST00000539320 A0A0G2JMZ2 1700 aa26.62■■□□□ 1.85
SCARB1-206ENST00000539320 ROBO3Q96MS0 1386 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 GSG1L2A8MUP6 293 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 PRKAR2AP13861 404 aaKnown RBP26.61■■□□□ 1.85
SCARB1-206ENST00000539320 SBK1Q52WX2 424 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 KIAA1755Q5JYT7 1200 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 MAP3K21Q5TCX8 1036 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 SIAH1Q8IUQ4 282 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 VCPKMTQ9H867 229 aa26.61■■□□□ 1.85
SCARB1-206ENST00000539320 MX1P20591 662 aa26.6■■□□□ 1.85
SCARB1-206ENST00000539320 MAP2K5Q13163 448 aa26.6■■□□□ 1.85
SCARB1-206ENST00000539320 COG2Q14746 738 aa26.6■■□□□ 1.85
SCARB1-206ENST00000539320 DPF3Q92784 378 aa26.6■■□□□ 1.85
SCARB1-206ENST00000539320 EPB41L4AQ9HCS5 686 aaPredicted RBP26.6■■□□□ 1.85
SCARB1-206ENST00000539320 RLFQ13129 1914 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 H0YGN5 161 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 M0R2C6 588 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 GNAT2P19087 354 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 SPICE1Q8N0Z3 855 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 FSD1Q9BTV5 496 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 KANSL2Q9H9L4 492 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 HOXC10Q9NYD6 342 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 ZBTB47Q9UFB7 747 aaPredicted RBP26.59■■□□□ 1.85
SCARB1-206ENST00000539320 IVNS1ABPQ9Y6Y0 642 aa26.59■■□□□ 1.85
SCARB1-206ENST00000539320 GREB1LQ9C091 1923 aaPredicted RBP26.59■■□□□ 1.85
SCARB1-206ENST00000539320 SLC15A5A6NIM6 579 aa26.58■■□□□ 1.85
SCARB1-206ENST00000539320 WDR46O15213 610 aaKnown RBP26.58■■□□□ 1.85
SCARB1-206ENST00000539320 TDO2P48775 406 aa26.58■■□□□ 1.85
SCARB1-206ENST00000539320 ATP2B2Q01814 1243 aa26.58■■□□□ 1.85
SCARB1-206ENST00000539320 FLOT1O75955 427 aa26.57■■□□□ 1.84
SCARB1-206ENST00000539320 EEF2P13639 858 aaKnown RBP26.57■■□□□ 1.84
SCARB1-206ENST00000539320 PTPREP23469 700 aa26.57■■□□□ 1.84
SCARB1-206ENST00000539320 CCL14Q16627 93 aa26.57■■□□□ 1.84
SCARB1-206ENST00000539320 HABP4Q5JVS0 413 aaKnown RBP26.57■■□□□ 1.84
SCARB1-206ENST00000539320 MB21D1Q8N884 522 aa26.57■■□□□ 1.84
SCARB1-206ENST00000539320 ANKLE1Q8NAG6 615 aa26.57■■□□□ 1.84
SCARB1-206ENST00000539320 SALL3Q9BXA9 1300 aa26.57■■□□□ 1.84
SCARB1-206ENST00000539320 MINDY4BA8MYZ0 360 aa26.56■■□□□ 1.84
SCARB1-206ENST00000539320 DSG3P32926 999 aa26.56■■□□□ 1.84
SCARB1-206ENST00000539320 GRB14Q14449 540 aa26.56■■□□□ 1.84
SCARB1-206ENST00000539320 SPATC1LQ9H0A9 340 aa26.56■■□□□ 1.84
SCARB1-206ENST00000539320 TRIOBPQ9H2D6 2365 aa26.56■■□□□ 1.84
SCARB1-206ENST00000539320 RASA1P20936 1047 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 HDAC1Q13547 482 aaPredicted RBP26.55■■□□□ 1.84
SCARB1-206ENST00000539320 ANKRD45Q5TZF3 282 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 DIS3LQ8TF46 1054 aaKnown RBP26.55■■□□□ 1.84
SCARB1-206ENST00000539320 ATG4CQ96DT6 458 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 MOV10L1Q9BXT6 1211 aaKnown RBP26.55■■□□□ 1.84
SCARB1-206ENST00000539320 MKNK2Q9HBH9 465 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 GOPCQ9HD26 462 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 PARP14Q460N5 1801 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 ZNF236Q9UL36 1845 aa26.55■■□□□ 1.84
SCARB1-206ENST00000539320 APPP05067 770 aa26.54■■□□□ 1.84
SCARB1-206ENST00000539320 CACNB2Q08289 660 aaPredicted RBP26.54■■□□□ 1.84
SCARB1-206ENST00000539320 NECAB2Q7Z6G3 386 aa26.54■■□□□ 1.84
SCARB1-206ENST00000539320 STK11IPQ8N1F8 1099 aa26.54■■□□□ 1.84
SCARB1-206ENST00000539320 SHCBP1Q8NEM2 672 aa26.54■■□□□ 1.84
SCARB1-206ENST00000539320 PAWRQ96IZ0 340 aaKnown RBP26.54■■□□□ 1.84
SCARB1-206ENST00000539320 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.54■■□□□ 1.84
SCARB1-206ENST00000539320 HOXC6P09630 235 aa26.53■■□□□ 1.84
SCARB1-206ENST00000539320 ZMYM1Q5SVZ6 1142 aa26.53■■□□□ 1.84
SCARB1-206ENST00000539320 SEC62Q99442 399 aaKnown RBP26.53■■□□□ 1.84
SCARB1-206ENST00000539320 NACAP1Q9BZK3 213 aa26.53■■□□□ 1.84
SCARB1-206ENST00000539320 OGDHLQ9ULD0 1010 aa26.53■■□□□ 1.84
SCARB1-206ENST00000539320 NR2E3Q9Y5X4 410 aa26.53■■□□□ 1.84
SCARB1-206ENST00000539320 MFSD14CQ5VZR4 134 aa26.52■■□□□ 1.84
SCARB1-206ENST00000539320 SAMD1Q6SPF0 538 aaPredicted RBP26.52■■□□□ 1.84
SCARB1-206ENST00000539320 PATL2C9JE40 543 aaKnown RBP26.51■■□□□ 1.83
SCARB1-206ENST00000539320 ERCC3P19447 782 aa26.51■■□□□ 1.83
SCARB1-206ENST00000539320 CCND3P30281 292 aaPredicted RBP26.51■■□□□ 1.83
SCARB1-206ENST00000539320 PLS1Q14651 629 aa26.51■■□□□ 1.83
SCARB1-206ENST00000539320 IFNL3Q8IZI9 196 aa26.51■■□□□ 1.83
SCARB1-206ENST00000539320 ZNF287Q9HBT7 754 aa26.51■■□□□ 1.83
SCARB1-206ENST00000539320 FLRT1Q9NZU1 646 aa26.51■■□□□ 1.83
SCARB1-206ENST00000539320 COLQQ9Y215 455 aaPredicted RBP26.51■■□□□ 1.83
SCARB1-206ENST00000539320 RAD21O60216 631 aa26.5■■□□□ 1.83
SCARB1-206ENST00000539320 ALPK3Q96L96 1907 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 EVI5O60447 810 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 ADORA2AP29274 412 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 AAMPQ13685 434 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 FAM83BQ5T0W9 1011 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 NPLOC4Q8TAT6 608 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 NBPF3Q9H094 633 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 NAPBQ9H115 298 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 FBXO28Q9NVF7 368 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 NYAP2Q9P242 653 aa26.49■■□□□ 1.83
SCARB1-206ENST00000539320 STAP2Q9UGK3 403 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms