RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 EBF1Q9UH73 591 aa9.57□□□□□ -0.88
CCDC7-209ENST00000539197 ZGLP1P0C6A0 271 aa9.56□□□□□ -0.88
CCDC7-209ENST00000539197 SIAH1Q8IUQ4 282 aa9.56□□□□□ -0.88
CCDC7-209ENST00000539197 SLFN12Q8IYM2 578 aa9.56□□□□□ -0.88
CCDC7-209ENST00000539197 PDZD8Q8NEN9 1154 aa9.56□□□□□ -0.88
CCDC7-209ENST00000539197 CRELD1Q96HD1 420 aa9.56□□□□□ -0.88
CCDC7-209ENST00000539197 SORBS3O60504 671 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 HTR3BO95264 441 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 ZSCAN22P10073 491 aaPredicted RBP9.55□□□□□ -0.88
CCDC7-209ENST00000539197 LTKP29376 864 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 TNNI2P48788 182 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 OXR1Q8N573 874 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 GOLM1Q8NBJ4 401 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
CCDC7-209ENST00000539197 KREMEN1Q96MU8 473 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 VTI1BQ9UEU0 232 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
CCDC7-209ENST00000539197 KRTAP9-7A8MTY7 169 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 NPIPB6E9PJ23 425 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 GARTP22102 1010 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 RELL1Q8IUW5 271 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 LILRA2Q8N149 483 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 DHX38Q92620 1227 aaKnown RBP9.54□□□□□ -0.88
CCDC7-209ENST00000539197 SLC26A8Q96RN1 970 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 KIF2CQ99661 725 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 KRTAP4-9Q9BYQ8 210 aa9.54□□□□□ -0.88
CCDC7-209ENST00000539197 TCAF2A6NFQ2 919 aa9.53□□□□□ -0.88
CCDC7-209ENST00000539197 ETV2O00321 342 aaPredicted RBP9.53□□□□□ -0.88
CCDC7-209ENST00000539197 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
CCDC7-209ENST00000539197 GALK1P51570 392 aa9.53□□□□□ -0.88
CCDC7-209ENST00000539197 ATG14Q6ZNE5 492 aa9.53□□□□□ -0.88
CCDC7-209ENST00000539197 COPRSQ9NQ92 184 aa9.53□□□□□ -0.88
CCDC7-209ENST00000539197 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
CCDC7-209ENST00000539197 GLDCP23378 1020 aa9.52□□□□□ -0.89
CCDC7-209ENST00000539197 SNAP47Q5SQN1 464 aa9.52□□□□□ -0.89
CCDC7-209ENST00000539197 KCNN1Q92952 543 aa9.52□□□□□ -0.89
CCDC7-209ENST00000539197 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
CCDC7-209ENST00000539197 CD320Q9NPF0 282 aa9.52□□□□□ -0.89
CCDC7-209ENST00000539197 FITM1A5D6W6 292 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 PWP1Q13610 501 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 KCNA10Q16322 511 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 REC114Q7Z4M0 266 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 PHACTR4Q8IZ21 702 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 CCDC74BQ96LY2 380 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 ASPNQ9BXN1 380 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 KBTBD4Q9NVX7 518 aa9.51□□□□□ -0.89
CCDC7-209ENST00000539197 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
CCDC7-209ENST00000539197 TEKQ02763 1124 aa9.5□□□□□ -0.89
CCDC7-209ENST00000539197 VWCEQ96DN2 955 aa9.5□□□□□ -0.89
CCDC7-209ENST00000539197 SLC6A17Q9H1V8 727 aa9.5□□□□□ -0.89
CCDC7-209ENST00000539197 MRS2Q9HD23 443 aa9.5□□□□□ -0.89
CCDC7-209ENST00000539197 RBM47A0AV96 593 aaKnown RBP9.49□□□□□ -0.89
CCDC7-209ENST00000539197 EFEMP2O95967 443 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 CHMP4BP1P59074 171 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 NR0B2Q15466 257 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 CIAPIN1Q6FI81 312 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 FBXL19Q6PCT2 694 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 IRF2BP1Q8IU81 584 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 SPPL2CQ8IUH8 684 aa9.49□□□□□ -0.89
CCDC7-209ENST00000539197 SMG5Q9UPR3 1016 aaKnown RBP9.49□□□□□ -0.89
CCDC7-209ENST00000539197 DUSP4Q13115 394 aa9.48□□□□□ -0.89
CCDC7-209ENST00000539197 MPP2Q14168 576 aa9.48□□□□□ -0.89
CCDC7-209ENST00000539197 CLEC16AQ2KHT3 1053 aa9.48□□□□□ -0.89
CCDC7-209ENST00000539197 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
CCDC7-209ENST00000539197 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
CCDC7-209ENST00000539197 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
CCDC7-209ENST00000539197 UBOX5O94941 541 aa9.47□□□□□ -0.89
CCDC7-209ENST00000539197 CHRNEQ04844 493 aa9.47□□□□□ -0.89
CCDC7-209ENST00000539197 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
CCDC7-209ENST00000539197 SLC22A31A6NKX4 558 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 PSPNO60542 156 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 POLR2BP30876 1174 aaKnown RBP9.46□□□□□ -0.9
CCDC7-209ENST00000539197 GBP1P32455 592 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 ITGAEP38570 1179 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 ERMP1Q7Z2K6 904 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 ZNF605Q86T29 641 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 G6PC3Q9BUM1 346 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 MCOLN1Q9GZU1 580 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 ASCC2Q9H1I8 757 aaPredicted RBP9.46□□□□□ -0.9
CCDC7-209ENST00000539197 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
CCDC7-209ENST00000539197 YBX2Q9Y2T7 364 aaKnown RBP9.46□□□□□ -0.9
CCDC7-209ENST00000539197 MYOCOSA0A1B0GUC4 107 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 NOTOA8MTQ0 251 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 MLECQ14165 292 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 SNX17Q15036 470 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
CCDC7-209ENST00000539197 GPR160Q9UJ42 338 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 PCDHB14Q9Y5E9 798 aa9.45□□□□□ -0.9
CCDC7-209ENST00000539197 NUAK1O60285 661 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 CRKP46108 304 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 LINC00310P59036 64 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
CCDC7-209ENST00000539197 TMC3Q7Z5M5 1100 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 SIRT2Q8IXJ6 389 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 ENOX1Q8TC92 643 aaKnown RBP9.44□□□□□ -0.9
CCDC7-209ENST00000539197 LINC01599Q8WXQ3 324 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 ZNF281Q9Y2X9 895 aa9.44□□□□□ -0.9
CCDC7-209ENST00000539197 RGS13O14921 159 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms