RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 H3BS24 57 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 CYP7A1P22680 504 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
SSPN-206ENST00000539019 GATAD2BQ8WXI9 593 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 RHOVQ96L33 236 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 LMCD1Q9NZU5 365 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 LRRIQ1Q96JM4 1722 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 GLI2P10070 1586 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 DIP2BQ9P265 1576 aa7.99□□□□□ -1.13
SSPN-206ENST00000539019 MINDY4BA8MYZ0 360 aa7.98□□□□□ -1.13
SSPN-206ENST00000539019 UPK3BL1B0FP48 263 aa7.98□□□□□ -1.13
SSPN-206ENST00000539019 UPK3BL2E5RIL1 263 aa7.98□□□□□ -1.13
SSPN-206ENST00000539019 BPNT1O95861 308 aa7.98□□□□□ -1.13
SSPN-206ENST00000539019 PLCG1P19174 1290 aa7.98□□□□□ -1.13
SSPN-206ENST00000539019 CARS2Q9HA77 564 aaKnown RBP7.98□□□□□ -1.13
SSPN-206ENST00000539019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
SSPN-206ENST00000539019 MAP3K1Q13233 1512 aa7.98□□□□□ -1.13
SSPN-206ENST00000539019 KIR3DL1P43629 444 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 FAM160A1Q05DH4 1040 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 DNAJB8Q8NHS0 232 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 UBE2FQ969M7 185 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 COX4I2Q96KJ9 171 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 CEP131Q9UPN4 1083 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 TNK2Q07912 1038 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 PWP1Q13610 501 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 PPP1R13LQ8WUF5 828 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 FAM168AQ92567 244 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 ZSWIM5Q9P217 1185 aa7.97□□□□□ -1.13
SSPN-206ENST00000539019 TROQ12816 1431 aaPredicted RBP7.96□□□□□ -1.13
SSPN-206ENST00000539019 HECW1Q76N89 1606 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 YBX3P16989 372 aaKnown RBP eCLIP7.96□□□□□ -1.14
SSPN-206ENST00000539019 ITGAEP38570 1179 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 ETV3P41162 512 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 TMEM201Q5SNT2 666 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 POU5F2Q8N7G0 328 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 GOLM1Q8NBJ4 401 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 FAM13CQ8NE31 585 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 CTNND2Q9UQB3 1225 aa7.96□□□□□ -1.14
SSPN-206ENST00000539019 CCDC18Q5T9S5 1454 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 GRIN3BO60391 1043 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 GARTP22102 1010 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 SNAP47Q5SQN1 464 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 THAP5Q7Z6K1 395 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 GIPC2Q8TF65 315 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 Q96M66 194 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 COPRSQ9NQ92 184 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 KBTBD4Q9NVX7 518 aa7.95□□□□□ -1.14
SSPN-206ENST00000539019 POLR3KQ9Y2Y1 108 aaPredicted RBP7.95□□□□□ -1.14
SSPN-206ENST00000539019 PRR36Q9H6K5 1346 aa7.94□□□□□ -1.14
SSPN-206ENST00000539019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSPN-206ENST00000539019 ZNF326Q5BKZ1 582 aaKnown RBP7.94□□□□□ -1.14
SSPN-206ENST00000539019 FBXO27Q8NI29 283 aa7.94□□□□□ -1.14
SSPN-206ENST00000539019 CYB5D2Q8WUJ1 264 aa7.94□□□□□ -1.14
SSPN-206ENST00000539019 REV1Q9UBZ9 1251 aa7.94□□□□□ -1.14
SSPN-206ENST00000539019 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
SSPN-206ENST00000539019 PLEKHD1A6NEE1 506 aa7.93□□□□□ -1.14
SSPN-206ENST00000539019 WASH4PA8MWX3 477 aa7.93□□□□□ -1.14
SSPN-206ENST00000539019 CHURC1-FNTBB4DL54 471 aa7.93□□□□□ -1.14
SSPN-206ENST00000539019 YARSP54577 528 aaKnown RBP7.93□□□□□ -1.14
SSPN-206ENST00000539019 ERMP1Q7Z2K6 904 aa7.93□□□□□ -1.14
SSPN-206ENST00000539019 PIWIL2Q8TC59 973 aaKnown RBP7.93□□□□□ -1.14
SSPN-206ENST00000539019 TMEM40Q8WWA1 233 aa7.93□□□□□ -1.14
SSPN-206ENST00000539019 TIAM1Q13009 1591 aa7.93□□□□□ -1.14
SSPN-206ENST00000539019 PPRC1Q5VV67 1664 aaKnown RBP7.93□□□□□ -1.14
SSPN-206ENST00000539019 KIF13AQ9H1H9 1805 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 HTR3BO95264 441 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 MPP2Q14168 576 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 FYB2Q5VWT5 728 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 FBXL19Q6PCT2 694 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 DUSP15Q9H1R2 295 aaPredicted RBP7.92□□□□□ -1.14
SSPN-206ENST00000539019 C19orf73Q9NVV2 129 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 KLHL3Q9UH77 587 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 ABCA9Q8IUA7 1624 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 MAP3K4Q9Y6R4 1608 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 GPATCH8Q9UKJ3 1502 aaKnown RBP7.92□□□□□ -1.14
SSPN-206ENST00000539019 PLCH2O75038 1416 aa7.92□□□□□ -1.14
SSPN-206ENST00000539019 TLR3O15455 904 aaKnown RBP7.91□□□□□ -1.14
SSPN-206ENST00000539019 MRPL58Q14197 206 aaKnown RBP7.91□□□□□ -1.14
SSPN-206ENST00000539019 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
SSPN-206ENST00000539019 REC114Q7Z4M0 266 aa7.91□□□□□ -1.14
SSPN-206ENST00000539019 ZSWIM9Q86XI8 627 aa7.91□□□□□ -1.14
SSPN-206ENST00000539019 SLFN12Q8IYM2 578 aa7.91□□□□□ -1.14
SSPN-206ENST00000539019 KIF14Q15058 1648 aa7.91□□□□□ -1.14
SSPN-206ENST00000539019 CD109Q6YHK3 1445 aa7.91□□□□□ -1.14
SSPN-206ENST00000539019 TTC37Q6PGP7 1564 aa7.9□□□□□ -1.14
SSPN-206ENST00000539019 DNAJA2O60884 412 aa7.9□□□□□ -1.14
SSPN-206ENST00000539019 ESR1P03372 595 aa7.9□□□□□ -1.14
SSPN-206ENST00000539019 C8AP07357 584 aa7.9□□□□□ -1.14
SSPN-206ENST00000539019 AFMP43652 599 aa7.9□□□□□ -1.14
SSPN-206ENST00000539019 KCNMB1Q16558 191 aa7.9□□□□□ -1.14
SSPN-206ENST00000539019 ZNF648Q5T619 568 aaPredicted RBP7.9□□□□□ -1.14
SSPN-206ENST00000539019 BAHD1Q8TBE0 780 aaPredicted RBP7.9□□□□□ -1.14
SSPN-206ENST00000539019 ARAP3Q8WWN8 1544 aa7.89□□□□□ -1.15
SSPN-206ENST00000539019 GREM1O60565 184 aa7.89□□□□□ -1.15
SSPN-206ENST00000539019 LRRN2O75325 713 aa7.89□□□□□ -1.15
SSPN-206ENST00000539019 EIF4A3P38919 411 aaKnown RBP7.89□□□□□ -1.15
SSPN-206ENST00000539019 GDNFP39905 211 aa7.89□□□□□ -1.15
SSPN-206ENST00000539019 CCDC74BQ96LY2 380 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms