RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 SAFBQ15424 915 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX11-212ENST00000538740 DCAF15Q66K64 600 aa20.96■□□□□ 0.95
DDX11-212ENST00000538740 FBXO18Q8NFZ0 1043 aa20.96■□□□□ 0.95
DDX11-212ENST00000538740 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX11-212ENST00000538740 TMEM39BQ9GZU3 492 aa20.96■□□□□ 0.95
DDX11-212ENST00000538740 ADARB2Q9NS39 739 aaKnown RBP20.96■□□□□ 0.95
DDX11-212ENST00000538740 PITPNM2Q9BZ72 1349 aa20.96■□□□□ 0.95
DDX11-212ENST00000538740 SCN4AP35499 1836 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 KRT85P78386 507 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 ICA1Q05084 483 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 SKOR2Q2VWA4 1001 aaPredicted RBP20.95■□□□□ 0.94
DDX11-212ENST00000538740 ATL3Q6DD88 541 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 MCTP1Q6DN14 999 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 NBPF11Q86T75 865 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 ARHGEF10LQ9HCE6 1279 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 CLIP2Q9UDT6 1046 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 CNTNAP5Q8WYK1 1306 aa20.95■□□□□ 0.94
DDX11-212ENST00000538740 FAM196BA6NMK8 535 aa20.94■□□□□ 0.94
DDX11-212ENST00000538740 TOMM70O94826 608 aa20.94■□□□□ 0.94
DDX11-212ENST00000538740 NCLP19338 710 aaKnown RBP20.94■□□□□ 0.94
DDX11-212ENST00000538740 FOSBP53539 338 aa20.94■□□□□ 0.94
DDX11-212ENST00000538740 ATP2B2Q01814 1243 aa20.94■□□□□ 0.94
DDX11-212ENST00000538740 GNL2Q13823 731 aaKnown RBP20.94■□□□□ 0.94
DDX11-212ENST00000538740 BRAPQ7Z569 592 aa20.94■□□□□ 0.94
DDX11-212ENST00000538740 FAM177A1Q8N128 213 aaPredicted RBP20.94■□□□□ 0.94
DDX11-212ENST00000538740 SH2D4AQ9H788 454 aa20.94■□□□□ 0.94
DDX11-212ENST00000538740 PALM3A6NDB9 673 aaPredicted RBP20.93■□□□□ 0.94
DDX11-212ENST00000538740 PLEKHA8P1O95397 391 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 APLP1P51693 650 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 MAP3K10Q02779 954 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 GPATCH4Q5T3I0 446 aaKnown RBP20.93■□□□□ 0.94
DDX11-212ENST00000538740 MKL1Q969V6 931 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 ZNF396Q96N95 335 aaPredicted RBP20.93■□□□□ 0.94
DDX11-212ENST00000538740 ANP32EQ9BTT0 268 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 BRMS1Q9HCU9 246 aa20.93■□□□□ 0.94
DDX11-212ENST00000538740 DOCK1Q14185 1865 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 DTNBO60941 627 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 DDNO94850 711 aaPredicted RBP20.92■□□□□ 0.94
DDX11-212ENST00000538740 GDF11O95390 407 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 GH2P01242 217 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 RESTQ13127 1097 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 ANGEL2Q5VTE6 544 aaKnown RBP20.92■□□□□ 0.94
DDX11-212ENST00000538740 FERMT3Q86UX7 667 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 LRRC47Q8N1G4 583 aaKnown RBP20.92■□□□□ 0.94
DDX11-212ENST00000538740 CCDC82Q8N4S0 544 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 DCAF4Q8WV16 495 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 DEFB129Q9H1M3 183 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 MAD2L2Q9UI95 211 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 CFAP45Q9UL16 551 aa20.92■□□□□ 0.94
DDX11-212ENST00000538740 KLRF2D3W0D1 207 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 PPFIA3O75145 1194 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 EGFRP00533 1210 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 ASNSP08243 561 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 PDHBP11177 359 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
DDX11-212ENST00000538740 FUT2Q10981 343 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 SEPT2Q15019 361 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 KRT40Q6A162 431 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 SRBD1Q8N5C6 995 aaKnown RBP20.91■□□□□ 0.94
DDX11-212ENST00000538740 TRPM4Q8TD43 1214 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 L3MBTL3Q96JM7 780 aaPredicted RBP20.91■□□□□ 0.94
DDX11-212ENST00000538740 SCAND2PQ9GZW5 306 aaPredicted RBP20.91■□□□□ 0.94
DDX11-212ENST00000538740 GGA3Q9NZ52 723 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 SEC63Q9UGP8 760 aaKnown RBP20.91■□□□□ 0.94
DDX11-212ENST00000538740 ZBTB21Q9ULJ3 1066 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 MTMR7Q9Y216 660 aa20.91■□□□□ 0.94
DDX11-212ENST00000538740 SNHG28P0DPA3 235 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 SCG2P13521 617 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 EPS15P42566 896 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 GUCY1B3Q02153 619 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 CCDC96Q2M329 555 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 ZNF341Q9BYN7 854 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 NMRK2Q9NPI5 230 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 PGAP2Q9UHJ9 254 aa20.9■□□□□ 0.94
DDX11-212ENST00000538740 V9GY48 417 aaPredicted RBP20.9■□□□□ 0.94
DDX11-212ENST00000538740 POLR2AP24928 1970 aaKnown RBP20.9■□□□□ 0.94
DDX11-212ENST00000538740 IQCA1LA6NCM1 817 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 hCG_1984214I3L0E3 225 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 CAP2P40123 477 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 PFKFB3Q16875 520 aaPredicted RBP20.89■□□□□ 0.93
DDX11-212ENST00000538740 SUPT20HL1Q3ZLR7 823 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 CMTR1Q8N1G2 835 aaKnown RBP20.89■□□□□ 0.93
DDX11-212ENST00000538740 ZNF713Q8N859 430 aaPredicted RBP20.89■□□□□ 0.93
DDX11-212ENST00000538740 GMCL1P1Q8NEA9 526 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 CCDC148Q8NFR7 591 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 CCDC12Q8WUD4 166 aaPredicted RBP20.89■□□□□ 0.93
DDX11-212ENST00000538740 DCPSQ96C86 337 aaKnown RBP20.89■□□□□ 0.93
DDX11-212ENST00000538740 RRP36Q96EU6 259 aaKnown RBP20.89■□□□□ 0.93
DDX11-212ENST00000538740 TEPSINQ96N21 525 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 GOPCQ9HD26 462 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 SH3GLB2Q9NR46 395 aa20.89■□□□□ 0.93
DDX11-212ENST00000538740 MMP1P03956 469 aa20.88■□□□□ 0.93
DDX11-212ENST00000538740 CALML3P27482 149 aa20.88■□□□□ 0.93
DDX11-212ENST00000538740 ZNF543Q08ER8 600 aa20.88■□□□□ 0.93
DDX11-212ENST00000538740 USP50Q70EL3 339 aaPredicted RBP20.88■□□□□ 0.93
DDX11-212ENST00000538740 DNAJC5GQ8N7S2 189 aa20.88■□□□□ 0.93
DDX11-212ENST00000538740 TMEM87AQ8NBN3 555 aa20.88■□□□□ 0.93
DDX11-212ENST00000538740 MBD3O95983 291 aa20.87■□□□□ 0.93
DDX11-212ENST00000538740 KIF23Q02241 960 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms