RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
CLN6-202ENST00000538696 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 SPRYD7Q5W111 196 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 Q6ZUG5 572 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 DGKHQ86XP1 1220 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
CLN6-202ENST00000538696 ZNF280CQ8ND82 737 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 ANKS1AQ92625 1134 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 CLIP2Q9UDT6 1046 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 KCNH4Q9UQ05 1017 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 ERICH2A1L162 156 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 TRIM75PA6NK02 468 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 HTRA3P83110 453 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 MKRN3Q13064 507 aaKnown RBP20.17■□□□□ 0.82
CLN6-202ENST00000538696 MTMR2Q13614 643 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 MKL1Q969V6 931 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 FEZ1Q99689 392 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 TPCN1Q9ULQ1 816 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 TMX2Q9Y320 296 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 PARP14Q460N5 1801 aa20.17■□□□□ 0.82
CLN6-202ENST00000538696 FAM155AB1AL88 458 aaPredicted RBP20.16■□□□□ 0.82
CLN6-202ENST00000538696 ZBTB48P10074 688 aaPredicted RBP20.16■□□□□ 0.82
CLN6-202ENST00000538696 TOP1P11387 765 aaKnown RBP20.16■□□□□ 0.82
CLN6-202ENST00000538696 DGKZQ13574 1117 aa20.16■□□□□ 0.82
CLN6-202ENST00000538696 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
CLN6-202ENST00000538696 ZYXQ15942 572 aaKnown RBP20.16■□□□□ 0.82
CLN6-202ENST00000538696 IFIT1BQ5T764 474 aaKnown RBP20.16■□□□□ 0.82
CLN6-202ENST00000538696 ZSCAN31Q96LW9 406 aaPredicted RBP20.16■□□□□ 0.82
CLN6-202ENST00000538696 AGXT2Q9BYV1 514 aa20.16■□□□□ 0.82
CLN6-202ENST00000538696 THSD7BQ9C0I4 1608 aa20.16■□□□□ 0.82
CLN6-202ENST00000538696 USP17L10C9JJH3 530 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 BACE1P56817 501 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 ST3GAL1Q11201 340 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 ME3Q16798 604 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 CYP4F22Q6NT55 531 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 KIAA1683Q9H0B3 1180 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 SH2D4AQ9H788 454 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 SYNPO2Q9UMS6 1093 aa20.15■□□□□ 0.82
CLN6-202ENST00000538696 A0A0G2JLL6 359 aaPredicted RBP20.14■□□□□ 0.81
CLN6-202ENST00000538696 CXCL11O14625 94 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 HSPA6P17066 643 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 LIFRP42702 1097 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 DEFB115Q30KQ5 88 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 KIAA1755Q5JYT7 1200 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
CLN6-202ENST00000538696 RASGRP2Q7LDG7 609 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 PRRT2Q7Z6L0 340 aaPredicted RBP20.14■□□□□ 0.81
CLN6-202ENST00000538696 FBXL16Q8N461 479 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 KAT14Q9H8E8 782 aa20.14■□□□□ 0.81
CLN6-202ENST00000538696 SH2B1Q9NRF2 756 aaPredicted RBP20.14■□□□□ 0.81
CLN6-202ENST00000538696 HMGCS2P54868 508 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 SH3D19Q5HYK7 790 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 SGMS1Q86VZ5 419 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 GMCL1P1Q8NEA9 526 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 BRF1Q92994 677 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 CCDC102AQ96A19 550 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 CHMP5Q9NZZ3 219 aa20.13■□□□□ 0.81
CLN6-202ENST00000538696 C19orf81C9J6K1 198 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 NDUFB10O96000 172 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 USP14P54578 494 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 FGD1P98174 961 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 SNAPC2Q13487 334 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 MOGSQ13724 837 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 CCDC83Q8IWF9 413 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 NECAB1Q8N987 351 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 MS4A4AQ96JQ5 239 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 CAPNS2Q96L46 248 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 C12orf42Q96LP6 360 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
CLN6-202ENST00000538696 RLFQ13129 1914 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 F5H6K3 240 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 KLRC3Q07444 240 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 APOBRQ0VD83 1088 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 GRM1Q13255 1194 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 SLFN13Q68D06 897 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 NFXL1Q6ZNB6 911 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 ZNF654Q8IZM8 581 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 INTS4Q96HW7 963 aaKnown RBP20.11■□□□□ 0.81
CLN6-202ENST00000538696 GOPCQ9HD26 462 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 CIZ1Q9ULV3 898 aaPredicted RBP20.11■□□□□ 0.81
CLN6-202ENST00000538696 MTMR7Q9Y216 660 aa20.11■□□□□ 0.81
CLN6-202ENST00000538696 CCDC69A6NI79 296 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 RAD21O60216 631 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 GTF2A2P52657 109 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 SPICE1Q8N0Z3 855 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 TMTC2Q8N394 836 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 BRI3BPQ8WY22 251 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 MYL10Q9BUA6 226 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 TMOD4Q9NZQ9 345 aa20.1■□□□□ 0.81
CLN6-202ENST00000538696 KLF18A0A0U1RQI7 1052 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 DDAH1O94760 285 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 SNHG28P0DPA3 235 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 PDHBP11177 359 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 VCAM1P19320 739 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms