RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 ZSCAN29Q8IWY8 852 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 MPHOSPH10O00566 681 aaKnown RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 RAD21O60216 631 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 RCAN1P53805 252 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 TRIM44Q96DX7 344 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 SDF4Q9BRK5 362 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 OSBPL5Q9H0X9 879 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 TTLL6Q8N841 843 aa16.27■□□□□ 0.19
ACTN1-205ENST00000538545 DNAJC18Q9H819 358 aa16.27■□□□□ 0.19
ACTN1-205ENST00000538545 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-205ENST00000538545 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 SCG2P13521 617 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-205ENST00000538545 NEDD1Q8NHV4 660 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 COL4A5P29400 1685 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 ZNF202O95125 648 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 NLRP5P59047 1200 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 GABPAQ06546 454 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 ZNF174Q15697 407 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-205ENST00000538545 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-205ENST00000538545 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
ACTN1-205ENST00000538545 FOCADQ5VW36 1801 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 SHMT1P34896 483 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 SASS6Q6UVJ0 657 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 PIK3AP1Q6ZUJ8 805 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 PDILTQ8N807 584 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 CLRN2A0PK11 232 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 KLRF2D3W0D1 207 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 FOXN1O15353 648 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 KRT2P35908 639 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 HHIPL2Q6UWX4 724 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 RBM43Q6ZSC3 357 aaKnown RBP16.25■□□□□ 0.19
ACTN1-205ENST00000538545 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
ACTN1-205ENST00000538545 MYH8P13535 1937 aa16.24■□□□□ 0.19
ACTN1-205ENST00000538545 GRM4Q14833 912 aa16.24■□□□□ 0.19
ACTN1-205ENST00000538545 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-205ENST00000538545 HEATR3Q7Z4Q2 680 aa16.24■□□□□ 0.19
ACTN1-205ENST00000538545 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
ACTN1-205ENST00000538545 LARGE2Q8N3Y3 721 aa16.24■□□□□ 0.19
ACTN1-205ENST00000538545 SUGT1Q9Y2Z0 365 aa16.24■□□□□ 0.19
ACTN1-205ENST00000538545 ADCY5O95622 1261 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 KIF5BP33176 963 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 PDLIM2Q96JY6 352 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 ZDHHC15Q96MV8 337 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 ZNF830Q96NB3 372 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-205ENST00000538545 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 SHTN1A0MZ66 631 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 CFAP100Q494V2 611 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 GPCPD1Q9NPB8 672 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-205ENST00000538545 PSMD14O00487 310 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 GDF11O95390 407 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 XBP1P17861 261 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 MTMR4Q9NYA4 1195 aa16.23■□□□□ 0.19
ACTN1-205ENST00000538545 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 CMA1P23946 247 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 SYKP43405 635 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 ZNF165P49910 485 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 LONRF3Q496Y0 759 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 TTBK2Q6IQ55 1244 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 ANKS1AQ92625 1134 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 TNFRSF25Q93038 417 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 SLC16A2P36021 539 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 PNOCQ13519 176 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 R3HDM1Q15032 1099 aaKnown RBP16.22■□□□□ 0.19
ACTN1-205ENST00000538545 RILPL1Q5EBL4 403 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 CERS3Q8IU89 383 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 FAM200AQ8TCP9 573 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 PIGSQ96S52 555 aa16.22■□□□□ 0.19
ACTN1-205ENST00000538545 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-205ENST00000538545 QSER1Q2KHR3 1735 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-205ENST00000538545 CSRNP2Q9H175 543 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 ZNF646O15015 1829 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-205ENST00000538545 PPP6R2O75170 966 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
ACTN1-205ENST00000538545 PDHBP11177 359 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 MCM7P33993 719 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 JAG1P78504 1218 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 KRI1Q8N9T8 703 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms