RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 NCOA5Q9HCD5 579 aaKnown RBP24.04■■□□□ 1.44
COPS7A-208ENST00000538410 MPHOSPH10O00566 681 aaKnown RBP24.03■■□□□ 1.44
COPS7A-208ENST00000538410 SUPT20HL1Q3ZLR7 823 aa24.03■■□□□ 1.44
COPS7A-208ENST00000538410 CATIPQ7Z7H3 387 aa24.03■■□□□ 1.44
COPS7A-208ENST00000538410 MYL10Q9BUA6 226 aa24.03■■□□□ 1.44
COPS7A-208ENST00000538410 TSKSQ9UJT2 592 aa24.03■■□□□ 1.44
COPS7A-208ENST00000538410 STX8Q9UNK0 236 aa24.03■■□□□ 1.44
COPS7A-208ENST00000538410 SMC3Q9UQE7 1217 aa24.03■■□□□ 1.44
COPS7A-208ENST00000538410 RXRAP19793 462 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 MIGA2Q7L4E1 593 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 LLPHQ9BRT6 129 aaKnown RBP24.02■■□□□ 1.44
COPS7A-208ENST00000538410 KAT14Q9H8E8 782 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 MTMR4Q9NYA4 1195 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 MYH6P13533 1939 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 GOLGA8AA7E2F4 631 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 DHX16O60231 1041 aaKnown RBP24.02■■□□□ 1.44
COPS7A-208ENST00000538410 ABCB5Q2M3G0 1257 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 TMEM47Q9BQJ4 181 aa24.02■■□□□ 1.44
COPS7A-208ENST00000538410 PPP1R12BO60237 982 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-208ENST00000538410 DDAH1O94760 285 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 GDF11O95390 407 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 CALM1P0DP23 149 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 CALM2P0DP24 149 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 CALM3P0DP25 149 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 TROAPQ12815 778 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 RRP1BQ14684 758 aaKnown RBP24.01■■□□□ 1.43
COPS7A-208ENST00000538410 NBPF12Q5TAG4 269 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-208ENST00000538410 TMEM179Q6ZVK1 233 aa24.01■■□□□ 1.43
COPS7A-208ENST00000538410 REM2Q8IYK8 340 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-208ENST00000538410 PPP4R3BQ5MIZ7 849 aa24■■□□□ 1.43
COPS7A-208ENST00000538410 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
COPS7A-208ENST00000538410 PNMA1Q8ND90 353 aa24■■□□□ 1.43
COPS7A-208ENST00000538410 NSUN7Q8NE18 718 aaKnown RBP24■■□□□ 1.43
COPS7A-208ENST00000538410 NUP133Q8WUM0 1156 aa24■■□□□ 1.43
COPS7A-208ENST00000538410 HOOK2Q96ED9 719 aa24■■□□□ 1.43
COPS7A-208ENST00000538410 FAM217BQ9NTX9 383 aaPredicted RBP24■■□□□ 1.43
COPS7A-208ENST00000538410 CTDNEP1O95476 244 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 TOP1P11387 765 aaKnown RBP23.99■■□□□ 1.43
COPS7A-208ENST00000538410 GJB2P29033 226 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 CDC27P30260 824 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 SHROOM1Q2M3G4 852 aaPredicted RBP23.99■■□□□ 1.43
COPS7A-208ENST00000538410 LDLRAD1Q5T700 205 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 FANCBQ8NB91 859 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 SMARCC2Q8TAQ2 1214 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 CABP5Q9NP86 173 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 CIZ1Q9ULV3 898 aaPredicted RBP23.99■■□□□ 1.43
COPS7A-208ENST00000538410 FZD1Q9UP38 647 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 DTNBO60941 627 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 TTLL1O95922 423 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 ADD1P35611 737 aaKnown RBP23.99■■□□□ 1.43
COPS7A-208ENST00000538410 JAG1P78504 1218 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 PPP2R5BQ15173 497 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 MAP3K11Q16584 847 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 RTN1Q16799 776 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 KANSL2Q9H9L4 492 aa23.99■■□□□ 1.43
COPS7A-208ENST00000538410 SSC5DA1L4H1 1573 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 DOCK1Q14185 1865 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 CPLX1O14810 134 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 GH2P01242 217 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 GUCY1A2P33402 732 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 SEPT2Q15019 361 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 DCAF15Q66K64 600 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 CLEC10AQ8IUN9 316 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 CHMP5Q9NZZ3 219 aa23.98■■□□□ 1.43
COPS7A-208ENST00000538410 CCDC196A0A1B0GTZ2 297 aa23.97■■□□□ 1.43
COPS7A-208ENST00000538410 PHF20L1A8MW92 1017 aa23.97■■□□□ 1.43
COPS7A-208ENST00000538410 JAK2O60674 1132 aa23.97■■□□□ 1.43
COPS7A-208ENST00000538410 MAP3K14Q99558 947 aa23.97■■□□□ 1.43
COPS7A-208ENST00000538410 CLIP2Q9UDT6 1046 aa23.97■■□□□ 1.43
COPS7A-208ENST00000538410 PTPDC1A2A3K4 754 aa23.96■■□□□ 1.43
COPS7A-208ENST00000538410 CAP2P40123 477 aa23.96■■□□□ 1.43
COPS7A-208ENST00000538410 CPLX2Q6PUV4 134 aaKnown RBP23.96■■□□□ 1.43
COPS7A-208ENST00000538410 RNF186Q9NXI6 227 aa23.96■■□□□ 1.43
COPS7A-208ENST00000538410 SAGE1Q9NXZ1 904 aa23.96■■□□□ 1.43
COPS7A-208ENST00000538410 NYAP2Q9P242 653 aa23.96■■□□□ 1.43
COPS7A-208ENST00000538410 IREB2P48200 963 aaKnown RBP23.95■■□□□ 1.43
COPS7A-208ENST00000538410 HMGN5P82970 282 aaKnown RBP23.95■■□□□ 1.43
COPS7A-208ENST00000538410 NTRK3Q16288 839 aa23.95■■□□□ 1.43
COPS7A-208ENST00000538410 CTCFLQ8NI51 663 aaPredicted RBP23.95■■□□□ 1.43
COPS7A-208ENST00000538410 RBM28Q9NW13 759 aaKnown RBP23.95■■□□□ 1.43
COPS7A-208ENST00000538410 ZBTB21Q9ULJ3 1066 aa23.95■■□□□ 1.43
COPS7A-208ENST00000538410 CASP8AP2Q9UKL3 1982 aa23.95■■□□□ 1.43
COPS7A-208ENST00000538410 TRPA1O75762 1119 aa23.95■■□□□ 1.42
COPS7A-208ENST00000538410 CDKL5O76039 1030 aa23.95■■□□□ 1.42
COPS7A-208ENST00000538410 MKRN3Q13064 507 aaKnown RBP23.95■■□□□ 1.42
COPS7A-208ENST00000538410 RAB3GAP1Q15042 981 aa23.95■■□□□ 1.42
COPS7A-208ENST00000538410 MKL1Q969V6 931 aa23.95■■□□□ 1.42
COPS7A-208ENST00000538410 SLC10A4Q96EP9 437 aa23.95■■□□□ 1.42
COPS7A-208ENST00000538410 ZNF341Q9BYN7 854 aa23.95■■□□□ 1.42
COPS7A-208ENST00000538410 UNCXA6NJT0 531 aa23.94■■□□□ 1.42
COPS7A-208ENST00000538410 USP2O75604 605 aaPredicted RBP23.94■■□□□ 1.42
COPS7A-208ENST00000538410 EEF2P13639 858 aaKnown RBP23.94■■□□□ 1.42
COPS7A-208ENST00000538410 ICA1Q05084 483 aa23.94■■□□□ 1.42
COPS7A-208ENST00000538410 DDX11Q96FC9 970 aa23.94■■□□□ 1.42
COPS7A-208ENST00000538410 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.94■■□□□ 1.42
COPS7A-208ENST00000538410 IFNAR1P17181 557 aa23.93■■□□□ 1.42
COPS7A-208ENST00000538410 ATP2B2Q01814 1243 aa23.93■■□□□ 1.42
COPS7A-208ENST00000538410 GRM4Q14833 912 aa23.93■■□□□ 1.42
COPS7A-208ENST00000538410 SIAH1Q8IUQ4 282 aa23.93■■□□□ 1.42
COPS7A-208ENST00000538410 LRRC47Q8N1G4 583 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms