RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 PPFIBP2Q8ND30 876 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 POLR2MP0CAP2 368 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 ARHGAP27Q6ZUM4 889 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 MAIP1Q8WWC4 291 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 PSTPIP2Q9H939 334 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 AFG3L2Q9Y4W6 797 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 MCF2L2Q86YR7 1114 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 MICALL1Q8N3F8 863 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 RNF169Q8NCN4 708 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 IQCDQ96DY2 449 aa18.61■□□□□ 0.57
SCARB1-205ENST00000538291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.61■□□□□ 0.572e-9■■□□□ 13.8
SCARB1-205ENST00000538291 GIGYF1O75420 1035 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-205ENST00000538291 FAM102BQ5T8I3 360 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 STMN2Q93045 179 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 TTLL3Q9Y4R7 772 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 TRIM31Q9BZY9 425 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 TRIM35Q9UPQ4 493 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 ARHGEF12Q9NZN5 1544 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 TCP10L2B9ZVM9 353 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 LACTBP83111 547 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-205ENST00000538291 CERKLQ49MI3 558 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-205ENST00000538291 CASC4Q6P4E1 433 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 GADL1Q6ZQY3 521 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 ZSCAN10Q96SZ4 725 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-205ENST00000538291 ADPGKQ9BRR6 497 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 ARHGAP44Q17R89 818 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 KIAA0825Q8IV33 1275 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 TSKSQ9UJT2 592 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 H0YCG3 227 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 HPDP32754 393 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-205ENST00000538291 ANKRD35Q8N283 1001 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 NLGN1Q8N2Q7 840 aa18.6■□□□□ 0.57
SCARB1-205ENST00000538291 NPC1L1Q9UHC9 1359 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-205ENST00000538291 ERCC3P19447 782 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 RDH13Q8NBN7 331 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 PLEKHG3A1L390 1219 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 PHKG2P15735 406 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 GYG1P46976 350 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 ST7Q9NRC1 585 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 RPS6KA1Q15418 735 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 GPBP1Q86WP2 473 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 GPATCH11Q8N954 259 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 ANO3Q9BYT9 981 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 CNGA1P29973 690 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 PEX26Q7Z412 305 aa18.59■□□□□ 0.57
SCARB1-205ENST00000538291 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-205ENST00000538291 CCDC94Q9BW85 323 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-205ENST00000538291 ATF7P17544 494 aaPredicted RBP18.58■□□□□ 0.57
SCARB1-205ENST00000538291 LIG4P49917 911 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 CCDC105Q8IYK2 499 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 BLZF1Q9H2G9 400 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 SWAP70Q9UH65 585 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 TACC3Q9Y6A5 838 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 ICA1Q05084 483 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 PRR16Q569H4 304 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 BLIDQ8IZY5 108 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 CCDC89Q8N998 374 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 IMPACTQ9P2X3 320 aa18.58■□□□□ 0.57
SCARB1-205ENST00000538291 SLC12A2P55011 1212 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 CEP57Q86XR8 500 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 SLFN12Q8IYM2 578 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 ERO1AQ96HE7 468 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 MED10Q9BTT4 135 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 KIAA0232Q92628 1395 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 SCNN1DP51172 638 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 DOK7Q18PE1 504 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 XKR9Q5GH70 373 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 FBXO11Q86XK2 927 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 IFNL3Q8IZI9 196 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 PRPF31Q8WWY3 499 aaKnown RBP18.58■□□□□ 0.56
SCARB1-205ENST00000538291 ZBTB9Q96C00 473 aa18.58■□□□□ 0.56
SCARB1-205ENST00000538291 TNNC2P02585 160 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 GOLGA5Q8TBA6 731 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 STAMQ92783 540 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 TM6SF1Q9BZW5 370 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 XRCC5P13010 732 aaKnown RBP18.57■□□□□ 0.56
SCARB1-205ENST00000538291 SEC24BO95487 1268 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 FAM193BQ96PV7 902 aaPredicted RBP18.57■□□□□ 0.56
SCARB1-205ENST00000538291 FEZ2Q9UHY8 353 aaPredicted RBP18.57■□□□□ 0.56
SCARB1-205ENST00000538291 BTDP43251 543 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 LRMPQ12912 555 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 SDCCAG8Q86SQ7 713 aaPredicted RBP18.57■□□□□ 0.56
SCARB1-205ENST00000538291 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
SCARB1-205ENST00000538291 ARHGAP6O43182 974 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 PCCAP05165 728 aaPredicted RBP18.57■□□□□ 0.56
SCARB1-205ENST00000538291 CYP2J2P51589 502 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 CUL4BQ13620 913 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 HHATQ5VTY9 493 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 RUFY4Q6ZNE9 571 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 PNMA1Q8ND90 353 aa18.57■□□□□ 0.56
SCARB1-205ENST00000538291 JAK2O60674 1132 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 PPP2R5CQ13362 524 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 NCAPG2Q86XI2 1143 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms