RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 LDHBP07195 334 aaKnown RBP5.53□□□□□ -1.52
SNHG1-208ENST00000538266 PTPRAP18433 802 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 CDC27P30260 824 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 CDC25BP30305 580 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 TRIM28Q13263 835 aaKnown RBP5.53□□□□□ -1.52
SNHG1-208ENST00000538266 SLC39A6Q13433 755 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.53□□□□□ -1.522e-12■■□□□ 11.6
SNHG1-208ENST00000538266 ALG1LQ6GMV1 187 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 ASAP3Q8TDY4 903 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 FMNL2Q96PY5 1086 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 SETDB2Q96T68 719 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 LIN7BQ9HAP6 207 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 ATG3Q9NT62 314 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 BABAM1Q9NWV8 329 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 MIS18AQ9NYP9 233 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 NOP53Q9NZM5 478 aaKnown RBP5.53□□□□□ -1.52
SNHG1-208ENST00000538266 PPME1Q9Y570 386 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 LY75O60449 1722 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 KDM3BQ7LBC6 1761 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 UBR2Q8IWV8 1755 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 ZBED9Q6R2W3 1325 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 E9PSI1 815 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 CHL1O00533 1208 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 STARD3NLO95772 234 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 TXNRD1Q16881 649 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 PI16Q6UXB8 463 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 ADAMTSL4Q6UY14 1074 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 DEFB132Q7Z7B7 95 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 NPAS4Q8IUM7 802 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 CCNJLQ8IV13 435 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 BSNDQ8WZ55 320 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 ZNF496Q96IT1 587 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-208ENST00000538266 TEX13AQ9BXU3 409 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-208ENST00000538266 ADAM19Q9H013 955 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 MUC3BQ9H195 1237 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 C5P01031 1676 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 KCPQ6ZWJ8 1503 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 HEG1Q9ULI3 1381 aa5.52□□□□□ -1.53
SNHG1-208ENST00000538266 ZNF521Q96K83 1311 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 FANCIQ9NVI1 1328 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 ZNF831Q5JPB2 1677 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 RREB1Q92766 1687 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 METTL12A8MUP2 240 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 LINC01387J3KSC0 135 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 SNRPA1P09661 255 aaKnown RBP5.51□□□□□ -1.53
SNHG1-208ENST00000538266 FGD1P98174 961 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 EZH2Q15910 746 aaKnown RBP5.51□□□□□ -1.53
SNHG1-208ENST00000538266 NPM2Q86SE8 214 aaKnown RBP5.51□□□□□ -1.53
SNHG1-208ENST00000538266 FBF1Q8TES7 1133 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 TSR2Q969E8 191 aaKnown RBP5.51□□□□□ -1.53
SNHG1-208ENST00000538266 CAMKK2Q96RR4 588 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 TCF12Q99081 682 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 CHMP4AQ9BY43 222 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 BCO2Q9BYV7 579 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 LAMB4A4D0S4 1761 aa5.51□□□□□ -1.53
SNHG1-208ENST00000538266 CICQ96RK0 1608 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-208ENST00000538266 A0A096LPE4 126 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 A0A0A0MRY4 1105 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 A0A1W2PPZ6 126 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 RNF225M0QZC1 329 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-208ENST00000538266 KCNQ3O43525 872 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 HOXB7P09629 217 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 ZNF853P0CG23 659 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 COL8A1P27658 744 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 GRIA4P48058 902 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 EIF4A1P60842 406 aaKnown RBP5.5□□□□□ -1.53
SNHG1-208ENST00000538266 RAC1P63000 192 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 KCNMA1Q12791 1236 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 ITPK1Q13572 414 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 GRM2Q14416 872 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 SPRED3Q2MJR0 410 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 PRRT3Q5FWE3 981 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 DUSP27Q5VZP5 1158 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 FAM117BQ6P1L5 589 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 TXNDC11Q6PKC3 985 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 NXPE4Q6UWF7 544 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 DNAJC10Q8IXB1 793 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 BHLHE41Q9C0J9 482 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-208ENST00000538266 STK32BQ9NY57 414 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 TFCP2L1Q9NZI6 479 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 C4BP0C0L5 1744 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 TJP1Q07157 1748 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 NUP188Q5SRE5 1749 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 TAF1LQ8IZX4 1826 aa5.5□□□□□ -1.53
SNHG1-208ENST00000538266 SOS1Q07889 1333 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 CNTNAP4Q9C0A0 1308 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 COL5A3P25940 1745 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 ELL2O00472 640 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 PRPF40AO75400 957 aaKnown RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 EIF2S2P20042 333 aaKnown RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 EPHA1P21709 976 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 CRKLP46109 303 aaKnown RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 TAGLNQ01995 201 aaKnown RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 RASSF7Q02833 373 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 SLFN5Q08AF3 891 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 TWISTNBQ3B726 338 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-208ENST00000538266 DTWD1Q8N5C7 304 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 LINC00116Q8NCU8 138 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 DUSP9Q99956 384 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms