RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 SCAF8Q9UPN6 1271 aaKnown RBP14.35□□□□□ -0.11
DDB1-209ENST00000537877 SSC5DA1L4H1 1573 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 ASNSP08243 561 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 SUPT20HL1Q3ZLR7 823 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 ASPRV1Q53RT3 343 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 LRRC47Q8N1G4 583 aaKnown RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 ZDHHC9Q9Y397 364 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 MYH6P13533 1939 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 CNTNAP5Q8WYK1 1306 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 VPS37CA5D8V6 355 aaPredicted RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 PALM3A6NDB9 673 aaPredicted RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 PHF20L1A8MW92 1017 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 PLEKHA8P1O95397 391 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 DEXIO95424 95 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 PARP1P09874 1014 aaKnown RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 PDHBP11177 359 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 JAG1P78504 1218 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 ATP2B2Q01814 1243 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 FUT2Q10981 343 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
DDB1-209ENST00000537877 PHKBQ93100 1093 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 MAD2L2Q9UI95 211 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
DDB1-209ENST00000537877 PAPPA2Q9BXP8 1791 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 H3BQV1 296 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 PRPF3O43395 683 aaKnown RBP14.33□□□□□ -0.12
DDB1-209ENST00000537877 DTNBO60941 627 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 SMARCA1P28370 1054 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 GPATCH4Q5T3I0 446 aaKnown RBP14.33□□□□□ -0.12
DDB1-209ENST00000537877 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 DCAF4Q8WV16 495 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.12
DDB1-209ENST00000537877 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 ZNF112Q9UJU3 913 aa14.33□□□□□ -0.12
DDB1-209ENST00000537877 POLR2AP24928 1970 aaKnown RBP14.33□□□□□ -0.12
DDB1-209ENST00000537877 POTECB2RU33 542 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 F13A1P00488 732 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 KRT26Q7Z3Y9 468 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 USP48Q86UV5 1035 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 SRBD1Q8N5C6 995 aaKnown RBP14.32□□□□□ -0.12
DDB1-209ENST00000537877 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 GBP4Q96PP9 640 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
DDB1-209ENST00000537877 USP17L5A8MUK1 530 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 PPFIA3O75145 1194 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 ZNF543Q08ER8 600 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 EAPPQ56P03 285 aaPredicted RBP14.31□□□□□ -0.12
DDB1-209ENST00000537877 CDC37L1Q7L3B6 337 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 MTMR7Q9Y216 660 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
DDB1-209ENST00000537877 ADM5C9JUS6 153 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 XBP1P17861 261 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 NF2P35240 595 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 TRIM29Q14134 588 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
DDB1-209ENST00000537877 PRAMEF18Q5VWM3 479 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
DDB1-209ENST00000537877 CCDC82Q8N4S0 544 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 FBXO18Q8NFZ0 1043 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 KLRG1Q96E93 195 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 GOPCQ9HD26 462 aa14.3□□□□□ -0.12
DDB1-209ENST00000537877 F5H6K3 240 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
DDB1-209ENST00000537877 INPP5BP32019 993 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 KLRC3Q07444 240 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 CCDC96Q2M329 555 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 SLFN13Q68D06 897 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
DDB1-209ENST00000537877 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
DDB1-209ENST00000537877 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
DDB1-209ENST00000537877 A0A1W2PRG0 241 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
DDB1-209ENST00000537877 NDUFB10O96000 172 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 GOLGA8HP0CJ92 632 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 SCG2P13521 617 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 SLC1A4P43007 532 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 FOSBP53539 338 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 PKN1Q16512 942 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 PFKFB3Q16875 520 aaPredicted RBP14.28□□□□□ -0.12
DDB1-209ENST00000537877 FOXD4L5Q5VV16 416 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms