RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 UBE2Q2LH0YL09 131 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 ZBTB22O15209 634 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 MBD4O95243 580 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 SLC5A1P13866 664 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.21
CPSF7-218ENST00000537641 NACAP1Q9BZK3 213 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 ACBD3Q9H3P7 528 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 ZCCHC17Q9NP64 241 aaKnown RBP13.77□□□□□ -0.21
CPSF7-218ENST00000537641 LZTFL1Q9NQ48 299 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 SEC31BQ9NQW1 1179 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
CPSF7-218ENST00000537641 FEZ2Q9UHY8 353 aaPredicted RBP13.77□□□□□ -0.21
CPSF7-218ENST00000537641 A0A1B0GUL6 1792 aa13.77□□□□□ -0.21
CPSF7-218ENST00000537641 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 IVLP07476 585 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 ACTN2P35609 894 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 DPYDQ12882 1025 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 NR5A1Q13285 461 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-218ENST00000537641 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 PAGE5Q96GU1 130 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 TACC3Q9Y6A5 838 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 MYH8P13535 1937 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 GSG1L2A8MUP6 293 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 GYPCP04921 128 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
CPSF7-218ENST00000537641 KRT2P35908 639 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 ITPK1Q13572 414 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 CCDC152Q4G0S7 254 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 CTAGE6Q86UF2 777 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 CTAGE4Q8IX94 777 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 SLC35F6Q8N357 371 aa13.76□□□□□ -0.21
CPSF7-218ENST00000537641 IRX2Q9BZI1 471 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-218ENST00000537641 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
CPSF7-218ENST00000537641 IQSEC3Q9UPP2 1182 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-218ENST00000537641 A0A0G2JS52 829 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 CASP14P31944 242 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 TDO2P48775 406 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 LMAN1P49257 510 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 LEKR1Q6ZMV7 388 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 MAGEB6Q8N7X4 407 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 SPATA5Q8NB90 893 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 FAM71BQ8TC56 605 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 PNKPQ96T60 521 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
CPSF7-218ENST00000537641 NTSR2O95665 410 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 AKAP17AQ02040 695 aaKnown RBP13.74□□□□□ -0.21
CPSF7-218ENST00000537641 WDR93Q6P2C0 686 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 USP49Q70CQ1 688 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 ARMT1Q9H993 441 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 PDE11AQ9HCR9 933 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 ABHD10Q9NUJ1 306 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 ZNF652Q9Y2D9 606 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 DUOX1Q9NRD9 1551 aa13.74□□□□□ -0.21
CPSF7-218ENST00000537641 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 A0A087X0B3 334 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 LRRC10BA6NIK2 292 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 FXR1P51114 621 aaKnown RBP eCLIP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 STX17P56962 302 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 HELBQ8NG08 1087 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 SYMPKQ92797 1274 aaKnown RBP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 ZSWIM4Q9H7M6 989 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 BRMS1Q9HCU9 246 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 ABCB6Q9NP58 842 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 MED4Q9NPJ6 270 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 VPS18Q9P253 973 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 RWDD2AQ9UIY3 292 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 MCM3P25205 808 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 IGHMBP2P38935 993 aaKnown RBP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 AFMP43652 599 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 ERVK-24P63145 666 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 MCM6Q14566 821 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 RRP12Q5JTH9 1297 aaKnown RBP13.73□□□□□ -0.21
CPSF7-218ENST00000537641 SRLQ86TD4 932 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 ACRBPQ8NEB7 543 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 CPLX3Q8WVH0 158 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 RASSF4Q9H2L5 321 aa13.73□□□□□ -0.21
CPSF7-218ENST00000537641 VIPAS39Q9H9C1 493 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms