RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ATP2C1P98194 919 aaPredicted RBP16.27■□□□□ 0.2
USP44-203ENST00000537435 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
USP44-203ENST00000537435 MTF1Q14872 753 aa16.27■□□□□ 0.2
USP44-203ENST00000537435 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
USP44-203ENST00000537435 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
USP44-203ENST00000537435 STAMQ92783 540 aa16.27■□□□□ 0.2
USP44-203ENST00000537435 BAZ2AQ9UIF9 1905 aaKnown RBP16.27■□□□□ 0.2
USP44-203ENST00000537435 EFCAB8A8MWE9 144 aa16.27■□□□□ 0.19
USP44-203ENST00000537435 PPP1R3GB7ZBB8 358 aa16.27■□□□□ 0.19
USP44-203ENST00000537435 KIF20AO95235 890 aa16.27■□□□□ 0.19
USP44-203ENST00000537435 MECOMQ03112 1051 aa16.27■□□□□ 0.19
USP44-203ENST00000537435 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.19
USP44-203ENST00000537435 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.19
USP44-203ENST00000537435 DCP1AQ9NPI6 582 aaPredicted RBP16.27■□□□□ 0.19
USP44-203ENST00000537435 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.19
USP44-203ENST00000537435 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 ORC4O43929 436 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
USP44-203ENST00000537435 NLRP5P59047 1200 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 KARSQ15046 597 aaKnown RBP16.26■□□□□ 0.19
USP44-203ENST00000537435 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 PIK3AP1Q6ZUJ8 805 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 PANX2Q96RD6 677 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 KCNQ2O43526 872 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 MAP3K9P80192 1104 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 RBL2Q08999 1139 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 PPFIBP1Q86W92 1011 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
USP44-203ENST00000537435 ARGLU1Q9NWB6 273 aaPredicted RBP16.26■□□□□ 0.19
USP44-203ENST00000537435 XDHP47989 1333 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 SEMA3EO15041 775 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 SCG2P13521 617 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 PBX1P40424 430 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
USP44-203ENST00000537435 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 CRNKL1Q9BZJ0 848 aaKnown RBP16.25■□□□□ 0.19
USP44-203ENST00000537435 BLZF1Q9H2G9 400 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 MRPL44Q9H9J2 332 aaKnown RBP16.25■□□□□ 0.19
USP44-203ENST00000537435 CTNND2Q9UQB3 1225 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 MRFAP1Q9Y605 127 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 CYP2D6P10635 497 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 VEGFAP15692 232 aaPredicted RBP16.25■□□□□ 0.19
USP44-203ENST00000537435 E2F4Q16254 413 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
USP44-203ENST00000537435 IQUBQ8NA54 791 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 TFCP2L1Q9NZI6 479 aa16.25■□□□□ 0.19
USP44-203ENST00000537435 TAF1P21675 1872 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 COBLO75128 1261 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 CCDC175P0C221 793 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 PRDX5P30044 214 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 MCM7P33993 719 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 TSPY2A6NKD2 308 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 TPM1P09493 284 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 TRAPPC10P48553 1259 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 PPP2R3AQ06190 1150 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 TERF2Q15554 542 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
USP44-203ENST00000537435 RAD9BQ6WBX8 426 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 ATP8A2Q9NTI2 1148 aa16.24■□□□□ 0.19
USP44-203ENST00000537435 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 IL17AQ16552 155 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 EPC1Q9H2F5 836 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 MFAP3LO75121 409 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 ZRANB2O95218 330 aaKnown RBP eCLIP16.23■□□□□ 0.19
USP44-203ENST00000537435 KCNQ4P56696 695 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 RRAGBQ5VZM2 374 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 TBC1D9BQ66K14 1250 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 PDXDC2PQ6P474 469 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 CCDC12Q8WUD4 166 aaPredicted RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 MTRQ99707 1265 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 IRX2Q9BZI1 471 aaPredicted RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 ARPP21Q9UBL0 812 aaPredicted RBP16.23■□□□□ 0.19
USP44-203ENST00000537435 ADGRG1Q9Y653 693 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
USP44-203ENST00000537435 CASP14P31944 242 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 CCT6AP40227 531 aaKnown RBP16.22■□□□□ 0.19
USP44-203ENST00000537435 SLC10A5Q5PT55 438 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 LZTFL1Q9NQ48 299 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 COL22A1Q8NFW1 1626 aaPredicted RBP16.22■□□□□ 0.19
USP44-203ENST00000537435 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 TEX35Q5T0J7 233 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 PYM1Q9BRP8 204 aaKnown RBP16.22■□□□□ 0.19
USP44-203ENST00000537435 JAG2Q9Y219 1238 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
USP44-203ENST00000537435 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
USP44-203ENST00000537435 GYPCP04921 128 aa16.21■□□□□ 0.19
USP44-203ENST00000537435 RCSD1Q6JBY9 416 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms