RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 KRTAP4-2Q9BYR5 136 aa9.56□□□□□ -0.88
CCDC7-208ENST00000537047 EPB41L4BQ9H329 900 aa9.56□□□□□ -0.88
CCDC7-208ENST00000537047 NFIBO00712 420 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 SORBS3O60504 671 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 HTR3BO95264 441 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 LTKP29376 864 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 TNNI2P48788 182 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 GOLM1Q8NBJ4 401 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 RNF141Q8WVD5 230 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 KREMEN1Q96MU8 473 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 VTI1BQ9UEU0 232 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 KCNH3Q9ULD8 1083 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
CCDC7-208ENST00000537047 ZSCAN22P10073 491 aaPredicted RBP9.54□□□□□ -0.88
CCDC7-208ENST00000537047 GARTP22102 1010 aa9.54□□□□□ -0.88
CCDC7-208ENST00000537047 SIAH1Q8IUQ4 282 aa9.54□□□□□ -0.88
CCDC7-208ENST00000537047 KIF2CQ99661 725 aa9.54□□□□□ -0.88
CCDC7-208ENST00000537047 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
CCDC7-208ENST00000537047 ETV2O00321 342 aaPredicted RBP9.53□□□□□ -0.88
CCDC7-208ENST00000537047 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
CCDC7-208ENST00000537047 GALK1P51570 392 aa9.53□□□□□ -0.88
CCDC7-208ENST00000537047 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
CCDC7-208ENST00000537047 COPRSQ9NQ92 184 aa9.53□□□□□ -0.88
CCDC7-208ENST00000537047 SNAP47Q5SQN1 464 aa9.52□□□□□ -0.89
CCDC7-208ENST00000537047 ATG14Q6ZNE5 492 aa9.52□□□□□ -0.89
CCDC7-208ENST00000537047 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
CCDC7-208ENST00000537047 CD320Q9NPF0 282 aa9.52□□□□□ -0.89
CCDC7-208ENST00000537047 TMEM253P0C7T8 217 aa9.51□□□□□ -0.89
CCDC7-208ENST00000537047 REC114Q7Z4M0 266 aa9.51□□□□□ -0.89
CCDC7-208ENST00000537047 PHACTR4Q8IZ21 702 aa9.51□□□□□ -0.89
CCDC7-208ENST00000537047 PDZD8Q8NEN9 1154 aa9.51□□□□□ -0.89
CCDC7-208ENST00000537047 CCDC74BQ96LY2 380 aa9.51□□□□□ -0.89
CCDC7-208ENST00000537047 KBTBD4Q9NVX7 518 aa9.51□□□□□ -0.89
CCDC7-208ENST00000537047 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
CCDC7-208ENST00000537047 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
CCDC7-208ENST00000537047 TEKQ02763 1124 aa9.5□□□□□ -0.89
CCDC7-208ENST00000537047 VWCEQ96DN2 955 aa9.5□□□□□ -0.89
CCDC7-208ENST00000537047 MRS2Q9HD23 443 aa9.5□□□□□ -0.89
CCDC7-208ENST00000537047 RBM47A0AV96 593 aaKnown RBP9.49□□□□□ -0.89
CCDC7-208ENST00000537047 EFEMP2O95967 443 aa9.49□□□□□ -0.89
CCDC7-208ENST00000537047 FBXL19Q6PCT2 694 aa9.49□□□□□ -0.89
CCDC7-208ENST00000537047 MPP2Q14168 576 aa9.48□□□□□ -0.89
CCDC7-208ENST00000537047 KCNA10Q16322 511 aa9.48□□□□□ -0.89
CCDC7-208ENST00000537047 DIEXFQ68CQ4 756 aaKnown RBP9.48□□□□□ -0.89
CCDC7-208ENST00000537047 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
CCDC7-208ENST00000537047 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
CCDC7-208ENST00000537047 KCNN1Q92952 543 aa9.48□□□□□ -0.89
CCDC7-208ENST00000537047 SMG5Q9UPR3 1016 aaKnown RBP9.48□□□□□ -0.89
CCDC7-208ENST00000537047 UBOX5O94941 541 aa9.47□□□□□ -0.89
CCDC7-208ENST00000537047 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
CCDC7-208ENST00000537047 ASPNQ9BXN1 380 aa9.47□□□□□ -0.89
CCDC7-208ENST00000537047 SLC22A31A6NKX4 558 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 PSPNO60542 156 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 GLDCP23378 1020 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 POLR2BP30876 1174 aaKnown RBP9.46□□□□□ -0.9
CCDC7-208ENST00000537047 GBP1P32455 592 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 LILRA6Q6PI73 481 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 ERMP1Q7Z2K6 904 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 ZNF605Q86T29 641 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 OXR1Q8N573 874 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 G6PC3Q9BUM1 346 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 MCOLN1Q9GZU1 580 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
CCDC7-208ENST00000537047 MYOCOSA0A1B0GUC4 107 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 FITM1A5D6W6 292 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 TCAF2A6NFQ2 919 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 NOTOA8MTQ0 251 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 CLEC16AQ2KHT3 1053 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 TTLL10Q6ZVT0 673 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 GPR160Q9UJ42 338 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 PCDHB14Q9Y5E9 798 aa9.45□□□□□ -0.9
CCDC7-208ENST00000537047 CRKP46108 304 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
CCDC7-208ENST00000537047 PWP1Q13610 501 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 TMC3Q7Z5M5 1100 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 SIRT2Q8IXJ6 389 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 LILRA2Q8N149 483 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 LINC01599Q8WXQ3 324 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 DHX38Q92620 1227 aaKnown RBP9.44□□□□□ -0.9
CCDC7-208ENST00000537047 INTS4Q96HW7 963 aaKnown RBP9.44□□□□□ -0.9
CCDC7-208ENST00000537047 KRTAP4-11Q9BYQ6 195 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 YBX2Q9Y2T7 364 aaKnown RBP9.44□□□□□ -0.9
CCDC7-208ENST00000537047 ZNF281Q9Y2X9 895 aa9.44□□□□□ -0.9
CCDC7-208ENST00000537047 RGS13O14921 159 aa9.43□□□□□ -0.9
CCDC7-208ENST00000537047 NMIQ13287 307 aaPredicted RBP9.43□□□□□ -0.9
CCDC7-208ENST00000537047 NR0B2Q15466 257 aa9.43□□□□□ -0.9
CCDC7-208ENST00000537047 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
CCDC7-208ENST00000537047 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
CCDC7-208ENST00000537047 MINPP1Q9UNW1 487 aa9.43□□□□□ -0.9
CCDC7-208ENST00000537047 LINC00310P59036 64 aa9.42□□□□□ -0.9
CCDC7-208ENST00000537047 SGPP1Q9BX95 441 aa9.42□□□□□ -0.9
CCDC7-208ENST00000537047 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
CCDC7-208ENST00000537047 GREM1O60565 184 aa9.41□□□□□ -0.9
CCDC7-208ENST00000537047 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-208ENST00000537047 RPL10P27635 214 aaKnown RBP9.41□□□□□ -0.9
CCDC7-208ENST00000537047 EIF4A3P38919 411 aaKnown RBP9.41□□□□□ -0.9
CCDC7-208ENST00000537047 CIAPIN1Q6FI81 312 aa9.41□□□□□ -0.9
CCDC7-208ENST00000537047 OVOS1Q6IE37 1185 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms