RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
TNFRSF1A-208ENST00000536194 RPAP3Q9H6T3 665 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-208ENST00000536194 TOMM22Q9NS69 142 aa13.4□□□□□ -0.26
TNFRSF1A-208ENST00000536194 B4E1Z4 1266 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 PEX10O60683 326 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TTLL1O95922 423 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CTGFP29279 349 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 MKL1Q969V6 931 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 KDM4AO75164 1064 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 OSBPP22059 807 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SP3Q02447 781 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 PABPC4Q13310 644 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 NECTIN1Q15223 517 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CATSPERGQ6ZRH7 1159 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 KIAA1211Q6ZU35 1233 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CD99L2Q8TCZ2 262 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SMCR8Q8TEV9 937 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 LPAR1Q92633 364 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ARHGAP39Q9C0H5 1083 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
TNFRSF1A-208ENST00000536194 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 F5H6K3 240 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 NDUFB10O96000 172 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 HERVK_113P62684 666 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 KLRC3Q07444 240 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 COL9A3Q14050 684 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 RASGRP2Q7LDG7 609 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ESR2Q92731 530 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 NUP88Q99567 741 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ZSWIM5Q9P217 1185 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 STX8Q9UNK0 236 aa13.37□□□□□ -0.27
TNFRSF1A-208ENST00000536194 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 E7EWF7 191 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SLC27A2O14975 620 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CNMDO75829 334 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 FAM110CQ1W6H9 321 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 FAM83BQ5T0W9 1011 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CYB5R4Q7L1T6 521 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
TNFRSF1A-208ENST00000536194 RAD21O60216 631 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 GCLCP48506 637 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 LBX2Q6XYB7 198 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 KRT23Q9C075 422 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 MORF4L1Q9UBU8 362 aa13.35□□□□□ -0.27
TNFRSF1A-208ENST00000536194 FLOT1O75955 427 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ANTXR2P58335 489 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 COG2Q14746 738 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 Q3C1V9 767 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 SLFN13Q68D06 897 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TRIM47Q96LD4 638 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
TNFRSF1A-208ENST00000536194 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-208ENST00000536194 DSG3P32926 999 aa13.33□□□□□ -0.28
TNFRSF1A-208ENST00000536194 NT5C2P49902 561 aa13.33□□□□□ -0.28
TNFRSF1A-208ENST00000536194 SEC23AQ15436 765 aa13.33□□□□□ -0.28
TNFRSF1A-208ENST00000536194 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
TNFRSF1A-208ENST00000536194 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
TNFRSF1A-208ENST00000536194 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms