RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MB21D1Q8N884 522 aa15.77■□□□□ 0.12
RTN3-207ENST00000536011 USP6NLQ92738 828 aa15.77■□□□□ 0.12
RTN3-207ENST00000536011 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.12
RTN3-207ENST00000536011 SLC15A5A6NIM6 579 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 SPDYE16A6NNV3 312 aaPredicted RBP15.76■□□□□ 0.11
RTN3-207ENST00000536011 PRKAB2O43741 272 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
RTN3-207ENST00000536011 PEX10O60683 326 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 COG2Q14746 738 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 SLC44A5Q8NCS7 719 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
RTN3-207ENST00000536011 NBPF3Q9H094 633 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
RTN3-207ENST00000536011 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 USP17L21D6R901 530 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 CNMDO75829 334 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 ZFYP08048 801 aaPredicted RBP15.75■□□□□ 0.11
RTN3-207ENST00000536011 TRIM32Q13049 653 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 MFSD14CQ5VZR4 134 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 KBTBD3Q8NAB2 608 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 OGDHLQ9ULD0 1010 aa15.75■□□□□ 0.11
RTN3-207ENST00000536011 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
RTN3-207ENST00000536011 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 AKR1B1P15121 316 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 PTPREP23469 700 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 CDK8P49336 464 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 EVX2Q03828 476 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 BTBD7Q9P203 1132 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 TMX2Q9Y320 296 aa15.74■□□□□ 0.11
RTN3-207ENST00000536011 TRIOBPQ9H2D6 2365 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 ERC2O15083 957 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 WDR46O15213 610 aaKnown RBP15.73■□□□□ 0.11
RTN3-207ENST00000536011 STRNO43815 780 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 FLOT1O75955 427 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 HOXC6P09630 235 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 GNAT2P19087 354 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 FXR1P51114 621 aaKnown RBP eCLIP15.73■□□□□ 0.11
RTN3-207ENST00000536011 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
RTN3-207ENST00000536011 GRB14Q14449 540 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 SHCBP1Q8NEM2 672 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 APPBP2Q92624 585 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 PUS7LQ9H0K6 701 aaKnown RBP15.73■□□□□ 0.11
RTN3-207ENST00000536011 C11orf49Q9H6J7 331 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 ZNF287Q9HBT7 754 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 SLC5A4Q9NY91 659 aa15.73■□□□□ 0.11
RTN3-207ENST00000536011 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 A0A0G2JMZ2 1700 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 A0A1W2PPC1 479 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 MSCO60682 206 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 ATP2B2Q01814 1243 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 CCL14Q16627 93 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 CTR9Q6PD62 1173 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 DIS3LQ8TF46 1054 aaKnown RBP15.72■□□□□ 0.11
RTN3-207ENST00000536011 STRBPQ96SI9 672 aaKnown RBP15.72■□□□□ 0.11
RTN3-207ENST00000536011 SPATC1LQ9H0A9 340 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 MROH8Q9H579 483 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
RTN3-207ENST00000536011 ZNF236Q9UL36 1845 aa15.72■□□□□ 0.11
RTN3-207ENST00000536011 CYP2D7A0A087X1C5 515 aa15.71■□□□□ 0.11
RTN3-207ENST00000536011 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
RTN3-207ENST00000536011 SBK1Q52WX2 424 aa15.71■□□□□ 0.11
RTN3-207ENST00000536011 DPP9Q86TI2 863 aa15.71■□□□□ 0.11
RTN3-207ENST00000536011 SPICE1Q8N0Z3 855 aa15.71■□□□□ 0.11
RTN3-207ENST00000536011 MOV10L1Q9BXT6 1211 aaKnown RBP15.71■□□□□ 0.11
RTN3-207ENST00000536011 MKNK2Q9HBH9 465 aa15.71■□□□□ 0.11
RTN3-207ENST00000536011 CHGBP05060 677 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
RTN3-207ENST00000536011 TDO2P48775 406 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 PLS1Q14651 629 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 CLEC10AQ8IUN9 316 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 ABRAQ8N0Z2 381 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 NACAP1Q9BZK3 213 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 RBM27Q9P2N5 1060 aaKnown RBP15.7■□□□□ 0.1
RTN3-207ENST00000536011 ROBO3Q96MS0 1386 aa15.7■□□□□ 0.1
RTN3-207ENST00000536011 GPAA1O43292 621 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 SLC25A27O95847 323 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 ERCC3P19447 782 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 ADORA2AP29274 412 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 CCND3P30281 292 aaPredicted RBP15.69■□□□□ 0.1
RTN3-207ENST00000536011 COPB2P35606 906 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 TSHZ3Q63HK5 1081 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 OLFML2BQ68BL8 750 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 NCAPG2Q86XI2 1143 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 SIAH1Q8IUQ4 282 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 C7orf61Q8IZ16 206 aa15.69■□□□□ 0.1
RTN3-207ENST00000536011 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 MINDY4BA8MYZ0 360 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 RAD21O60216 631 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 APPP05067 770 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 RRP1P56182 461 aaKnown RBP15.68■□□□□ 0.1
RTN3-207ENST00000536011 KIAA1755Q5JYT7 1200 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms