RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 STX8Q9UNK0 236 aa15.48■□□□□ 0.07
TMEM258-202ENST00000535042 SNX14Q9Y5W7 946 aa15.48■□□□□ 0.07
TMEM258-202ENST00000535042 F5H6K3 240 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
TMEM258-202ENST00000535042 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
TMEM258-202ENST00000535042 VCAM1P19320 739 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 KLRC3Q07444 240 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 OTUD7BQ6GQQ9 843 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 RALYLQ86SE5 291 aaKnown RBP15.47■□□□□ 0.07
TMEM258-202ENST00000535042 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
TMEM258-202ENST00000535042 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 SH2D4AQ9H788 454 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
TMEM258-202ENST00000535042 PTPRFP10586 1907 aa15.47■□□□□ 0.07
TMEM258-202ENST00000535042 FOXN1O15353 648 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 CA12O43570 354 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 NDUFB10O96000 172 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 ALDH1A1P00352 501 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 CYP2C8P10632 490 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 ZKSCAN1P17029 563 aaPredicted RBP15.46■□□□□ 0.07
TMEM258-202ENST00000535042 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.07
TMEM258-202ENST00000535042 CRHR2Q13324 411 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 SEC23AQ15436 765 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 TAF1CQ15572 869 aaPredicted RBP15.46■□□□□ 0.07
TMEM258-202ENST00000535042 IQCA1Q86XH1 822 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 DGKHQ86XP1 1220 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
TMEM258-202ENST00000535042 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 TTC14Q96N46 770 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 RPAP3Q9H6T3 665 aaPredicted RBP15.46■□□□□ 0.07
TMEM258-202ENST00000535042 SLC45A1Q9Y2W3 748 aa15.46■□□□□ 0.07
TMEM258-202ENST00000535042 TNKSO95271 1327 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 LOC285556D6RIA3 1793 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 RAD21O60216 631 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 TOP1P11387 765 aaKnown RBP15.45■□□□□ 0.06
TMEM258-202ENST00000535042 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 RASGRP2Q7LDG7 609 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 GMCL1P1Q8NEA9 526 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 LPAR1Q92633 364 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 NEK1Q96PY6 1258 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 NUP88Q99567 741 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-202ENST00000535042 BEGAINQ9BUH8 593 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 CFHR5Q9BXR6 569 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 ASCC2Q9H1I8 757 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-202ENST00000535042 SENP2Q9HC62 589 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 GOPCQ9HD26 462 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 GPHNQ9NQX3 736 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-202ENST00000535042 SAGE1Q9NXZ1 904 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 SYNPO2Q9UMS6 1093 aa15.45■□□□□ 0.06
TMEM258-202ENST00000535042 ADGRA2Q96PE1 1338 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 CEP350Q5VT06 3117 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L15C9J2P7 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L13C9JLJ4 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L11C9JVI0 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L18D6R9N7 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L22D6RA61 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L17D6RBQ6 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L19D6RCP7 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L20D6RJB6 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 PRC1O43663 620 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 CPA1P15085 419 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 USP17L24Q0WX57 530 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 FAM83BQ5T0W9 1011 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 SLFN13Q68D06 897 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 POTEEQ6S8J3 1075 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 CATSPERGQ6ZRH7 1159 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 P2RX7Q99572 595 aaKnown RBP15.44■□□□□ 0.06
TMEM258-202ENST00000535042 UBAC1Q9BSL1 405 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 ZFYVE28Q9HCC9 887 aa15.44■□□□□ 0.06
TMEM258-202ENST00000535042 IFIT3O14879 490 aaKnown RBP15.43■□□□□ 0.06
TMEM258-202ENST00000535042 WDR46O15213 610 aaKnown RBP15.43■□□□□ 0.06
TMEM258-202ENST00000535042 HSPA8P11142 646 aaKnown RBP15.43■□□□□ 0.06
TMEM258-202ENST00000535042 OSBPP22059 807 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 MCCP23508 829 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 MCM5P33992 734 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
TMEM258-202ENST00000535042 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.061e-19■■■■□ 25.7
TMEM258-202ENST00000535042 KRT32Q14532 448 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 JAKMIP1Q96N16 626 aaKnown RBP15.43■□□□□ 0.06
TMEM258-202ENST00000535042 PARK7Q99497 189 aaKnown RBP15.43■□□□□ 0.06
TMEM258-202ENST00000535042 LRRC2Q9BYS8 371 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
TMEM258-202ENST00000535042 TLR2O60603 784 aa15.42■□□□□ 0.06
TMEM258-202ENST00000535042 PEX10O60683 326 aa15.42■□□□□ 0.06
TMEM258-202ENST00000535042 IRX3P78415 501 aaPredicted RBP15.42■□□□□ 0.06
TMEM258-202ENST00000535042 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
TMEM258-202ENST00000535042 DHX32Q7L7V1 743 aaKnown RBP15.42■□□□□ 0.06
TMEM258-202ENST00000535042 TANGO6Q9C0B7 1094 aa15.42■□□□□ 0.06
TMEM258-202ENST00000535042 FBXO28Q9NVF7 368 aa15.42■□□□□ 0.06
TMEM258-202ENST00000535042 CPA4Q9UI42 421 aa15.42■□□□□ 0.06
TMEM258-202ENST00000535042 GPR25O00155 361 aa15.41■□□□□ 0.06
TMEM258-202ENST00000535042 SH2B2O14492 632 aaPredicted RBP15.41■□□□□ 0.06
TMEM258-202ENST00000535042 EIF5BO60841 1220 aaKnown RBP15.41■□□□□ 0.06
TMEM258-202ENST00000535042 HERVK_113P62684 666 aa15.41■□□□□ 0.06
TMEM258-202ENST00000535042 WTAPQ15007 396 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms