RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TMEM259Q4ZIN3 620 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 HOMEZQ8IX15 550 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 ERO1AQ96HE7 468 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 HAUS7Q99871 368 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 CFHR5Q9BXR6 569 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 CRNKL1Q9BZJ0 848 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 ARMT1Q9H993 441 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 CPA4Q9UI42 421 aa10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-219ENST00000534753 CXCL11O14625 94 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 MBD4O95243 580 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 CHGBP05060 677 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 CYP2C8P10632 490 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 CAP2P40123 477 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 SOX10P56693 466 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 USP46P62068 366 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 MAP3K10Q02779 954 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 SPP2Q13103 211 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 KIF22Q14807 665 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 SHROOM1Q2M3G4 852 aaPredicted RBP10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 ANKRD45Q5TZF3 282 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 ANKRD23Q86SG2 305 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 CERS3Q8IU89 383 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 SDR42E1Q8WUS8 393 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 EFCC1Q9HA90 598 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 MCM9Q9NXL9 1143 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 HPS5Q9UPZ3 1129 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 AFG3L2Q9Y4W6 797 aa10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
CCDC90B-219ENST00000534753 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 USP17L5A8MUK1 530 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 PRKAB2O43741 272 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 TLR2O60603 784 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 IGSF3O75054 1194 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 PKN2Q16513 984 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 NOM1Q5C9Z4 860 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 FASTKD5Q7L8L6 764 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 OTOP1Q7RTM1 612 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 TTC6Q86TZ1 520 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 OTUD7AQ8TE49 926 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 RIOK1Q9BRS2 568 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
CCDC90B-219ENST00000534753 CDK5RAP2Q96SN8 1893 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 COL2A1P02458 1487 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 A0A0G2JLL6 359 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 MPHOSPH10O00566 681 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 ADD2P35612 726 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 HMGCS2P54868 508 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 JAG1P78504 1218 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 MOGSQ13724 837 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 RAB3GAP1Q15042 981 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 ZSCAN25Q6NSZ9 544 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 FBXO46Q6PJ61 603 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 PRRT2Q7Z6L0 340 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 LAPTM4BQ86VI4 370 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 EXOC6Q8TAG9 804 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 SMCR8Q8TEV9 937 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 PARK7Q99497 189 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 ARHGAP39Q9C0H5 1083 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 DNAJC18Q9H819 358 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
CCDC90B-219ENST00000534753 LAMB1P07942 1786 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 GH2P01242 217 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 ASNSP08243 561 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 CYP2D6P10635 497 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 PLCD1P51178 756 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 CAP1Q01518 475 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 MTMR2Q13614 643 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 ARHGEF6Q15052 776 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 TREML2Q5T2D2 321 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 ADGRD1Q6QNK2 874 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 STK11IPQ8N1F8 1099 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 ZCCHC17Q9NP64 241 aaKnown RBP10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 SLC4A4Q9Y6R1 1079 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 MYH1P12882 1939 aa10.75□□□□□ -0.69
CCDC90B-219ENST00000534753 CYP2D7A0A087X1C5 515 aa10.74□□□□□ -0.69
CCDC90B-219ENST00000534753 RAD21O60216 631 aa10.74□□□□□ -0.69
CCDC90B-219ENST00000534753 PSMC4P43686 418 aa10.74□□□□□ -0.69
CCDC90B-219ENST00000534753 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
CCDC90B-219ENST00000534753 CERKLQ49MI3 558 aaPredicted RBP10.74□□□□□ -0.69
CCDC90B-219ENST00000534753 TMED8Q6PL24 325 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms