RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 AS3MTQ9HBK9 375 aa6.07□□□□□ -1.44
USH1C-210ENST00000534556 IL17RBQ9NRM6 502 aa6.07□□□□□ -1.44
USH1C-210ENST00000534556 SWAP70Q9UH65 585 aa6.07□□□□□ -1.44
USH1C-210ENST00000534556 TMX2Q9Y320 296 aa6.07□□□□□ -1.44
USH1C-210ENST00000534556 MYH7BA7E2Y1 1941 aa6.07□□□□□ -1.44
USH1C-210ENST00000534556 MYPNQ86TC9 1320 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 KIAA1217Q5T5P2 1943 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 TRIM6-TRIM34B2RNG4 842 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 FMNL1O95466 1100 aaPredicted RBP6.06□□□□□ -1.44
USH1C-210ENST00000534556 IGHA2P01877 340 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 HSPD1P10809 573 aaKnown RBP6.06□□□□□ -1.44
USH1C-210ENST00000534556 TDO2P48775 406 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 ERVK-9P63128 1117 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 ERVK-24P63145 666 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 ICA1Q05084 483 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 PPARAQ07869 468 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 ALX1Q15699 326 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 CCL14Q16627 93 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 TTC22Q5TAA0 569 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 TMEM179Q6ZVK1 233 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 TBC1D10CQ8IV04 446 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 REPS2Q8NFH8 660 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
USH1C-210ENST00000534556 RILPL2Q969X0 211 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 CHMP4CQ96CF2 233 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 ATG4CQ96DT6 458 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 CEP95Q96GE4 821 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 PAGR1Q9BTK6 254 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 VCPKMTQ9H867 229 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 CABP5Q9NP86 173 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 TMOD4Q9NZQ9 345 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 ARPP21Q9UBL0 812 aaPredicted RBP6.06□□□□□ -1.44
USH1C-210ENST00000534556 TAF6LQ9Y6J9 622 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 DOCK5Q9H7D0 1870 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 PLIN4Q96Q06 1357 aa6.06□□□□□ -1.44
USH1C-210ENST00000534556 CCDC171Q6TFL3 1326 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L15C9J2P7 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L13C9JLJ4 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L11C9JVI0 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L18D6R9N7 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L22D6RA61 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L17D6RBQ6 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L19D6RCP7 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L20D6RJB6 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 ADCY3O60266 1144 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 APPP05067 770 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 FGRP09769 529 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 GRK4P32298 578 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 DSG3P32926 999 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 GCLCP48506 637 aaPredicted RBP6.05□□□□□ -1.44
USH1C-210ENST00000534556 NOVP48745 357 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 HAND2P61296 217 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 IRX3P78415 501 aaPredicted RBP6.05□□□□□ -1.44
USH1C-210ENST00000534556 PTH1RQ03431 593 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 USP17L24Q0WX57 530 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 SLC9C1Q4G0N8 1177 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 MCMDC2Q4G0Z9 681 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 MORN1Q5T089 497 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 LBX2Q6XYB7 198 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 NEDD1Q8NHV4 660 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 TRIB2Q92519 343 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 MKL1Q969V6 931 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 CCDC17Q96LX7 622 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 FEZ1Q99689 392 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 UNC93B1Q9H1C4 597 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 HELLSQ9NRZ9 838 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 MTMR4Q9NYA4 1195 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 FLRT1Q9NZU1 646 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 PCDH10Q9P2E7 1040 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 ANAPC4Q9UJX5 808 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 ADAMTS5Q9UNA0 930 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 REV3LO60673 3130 aa6.05□□□□□ -1.44
USH1C-210ENST00000534556 NEDD4P46934 1319 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 F5H6K3 240 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 TNPO2O14787 897 aaKnown RBP6.04□□□□□ -1.44
USH1C-210ENST00000534556 NDUFB10O96000 172 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 CCL5P13501 91 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 TAL1P17542 331 aaPredicted RBP6.04□□□□□ -1.44
USH1C-210ENST00000534556 GNAT2P19087 354 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 MNX1P50219 401 aaPredicted RBP6.04□□□□□ -1.44
USH1C-210ENST00000534556 FCGRTP55899 365 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 TFAP4Q01664 338 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 ATP2B2Q01814 1243 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 KLRC3Q07444 240 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 IRF5Q13568 498 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 KIF22Q14807 665 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 TMEM132BQ14DG7 1078 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 FAM83BQ5T0W9 1011 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 RCSD1Q6JBY9 416 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 CWC27Q6UX04 472 aaKnown RBP6.04□□□□□ -1.44
USH1C-210ENST00000534556 GPR142Q7Z601 462 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 UBE2Q1Q7Z7E8 422 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 LRRC47Q8N1G4 583 aaKnown RBP6.04□□□□□ -1.44
USH1C-210ENST00000534556 TRPV1Q8NER1 839 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 GPRC5AQ8NFJ5 357 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 NPLOC4Q8TAT6 608 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 MOV10L1Q9BXT6 1211 aaKnown RBP6.04□□□□□ -1.44
USH1C-210ENST00000534556 NAPBQ9H115 298 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 KANSL2Q9H9L4 492 aa6.04□□□□□ -1.44
USH1C-210ENST00000534556 NYAP2Q9P242 653 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms