RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	FGR	P09769	529 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	CPB1	P15086	417 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ATF4	P18848	351 aa	Predicted RBP	6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ATP2B1	P20020	1258 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GART	P22102	1010 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	EIF4A3	P38919	411 aa	Known RBP	6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	LIG3	P49916	1009 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PWP1	Q13610	501 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	CEP135	Q66GS9	1140 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	WAPL	Q7Z5K2	1190 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	FAM35A	Q86V20	835 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RASGRP4	Q8TDF6	673 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PLD4	Q96BZ4	506 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	EAF1	Q96JC9	268 aa	Predicted RBP	6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	CEP44	Q9C0F1	390 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TAF1D	Q9H5J8	278 aa	Predicted RBP	6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	KCNQ5	Q9NR82	932 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PIM2	Q9P1W9	311 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	CCNL1	Q9UK58	526 aa	Predicted RBP	6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TLR6	Q9Y2C9	796 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	LY75	O60449	1722 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GPRASP1	Q5JY77	1395 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	IFT172	Q9UG01	1749 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ADARB2-AS1	A8MUL3	147 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ARAF	P10398	606 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RLBP1	P12271	317 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MX2	P20592	715 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	AKAP4	Q5JQC9	854 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	FBXL19	Q6PCT2	694 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TOM1L2	Q6ZVM7	507 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	VN1R5	Q7Z5H4	357 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	KIAA0825	Q8IV33	1275 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	BSND	Q8WZ55	320 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	DNAJC2	Q99543	621 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SOX13	Q9UN79	622 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	BDP1	A6H8Y1	2624 aa		6.6	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ADAMTSL1	Q8N6G6	1762 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RPTOR	Q8N122	1335 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	IQCA1L	A6NCM1	817 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GREM1	O60565	184 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	DDN	O94850	711 aa	Predicted RBP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PF4	P02776	101 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MMP10	P09238	476 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TFE3	P19532	575 aa	Predicted RBP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	EN2	P19622	333 aa	Predicted RBP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ADH7	P40394	386 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ZNF157	P51786	506 aa	Predicted RBP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	FAM160A1	Q05DH4	1040 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	COL9A2	Q14055	689 aa	Predicted RBP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ZNF423	Q2M1K9	1284 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RASIP1	Q5U651	963 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TTBK2	Q6IQ55	1244 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442		Q6ZNB5	142 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	AGMO	Q6ZNB7	445 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	FCHSD1	Q86WN1	690 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	VPS37D	Q86XT2	251 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ARMC5	Q96C12	935 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	LPIN3	Q9BQK8	851 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ADAM19	Q9H013	955 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RBSN	Q9H1K0	784 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SAGE1	Q9NXZ1	904 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TRIM33	Q9UPN9	1127 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	KAT6B	Q8WYB5	2073 aa		6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RBBP6	Q7Z6E9	1792 aa	Known RBP	6.59	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PLEKHH1	Q9ULM0	1364 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ADH6	P28332	368 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	LMNB2	Q03252	620 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	PCDH1	Q08174	1060 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	RBL2	Q08999	1139 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CAMK2G	Q13555	558 aa	Predicted RBP	6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NUTM2G	Q5VZR2	741 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	FBXO46	Q6PJ61	603 aa	Predicted RBP	6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ELMSAN1	Q6PJG2	1045 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	AMIGO3	Q86WK7	504 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SMG9	Q9H0W8	520 aa	Known RBP	6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CLEC4M	Q9H2X3	399 aa	Predicted RBP	6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	TMEM39A	Q9NV64	488 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GPN3	Q9UHW5	284 aa	Predicted RBP	6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ABCC6	O95255	1503 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SCN11A	Q9UI33	1791 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ANKRD11	Q6UB99	2663 aa	Predicted RBP	6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CCDC88A	Q3V6T2	1871 aa		6.58	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CPD	O75976	1380 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	TOGARAM1	Q9Y4F4	1720 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442		A0A1W2PPC1	479 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NEURL1B	A8MQ27	555 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	B3GALT4	O96024	378 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	PTPRA	P18433	802 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	BMP6	P22004	513 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	PCNX4	Q63HM2	1172 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	DPH6	Q7L8W6	267 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	STK35	Q8TDR2	534 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.57	□□□□□ -1.36	7e-6	■■■■□ 21.2
ECHDC1-223	ENST00000534442	NT5C1A	Q9BXI3	368 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	LNPK	Q9C0E8	428 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	LACRT	Q9GZZ8	138 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SH2B1	Q9NRF2	756 aa	Predicted RBP	6.57	□□□□□ -1.36

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