RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 SPDYE16A6NNV3 312 aaPredicted RBP27.87■■■□□ 2.05
YIF1A-213ENST00000534374 GPR142Q7Z601 462 aa27.87■■■□□ 2.05
YIF1A-213ENST00000534374 PLEKHH3Q7Z736 793 aa27.87■■■□□ 2.05
YIF1A-213ENST00000534374 USP6NLQ92738 828 aa27.87■■■□□ 2.05
YIF1A-213ENST00000534374 FSD1Q9BTV5 496 aa27.87■■■□□ 2.05
YIF1A-213ENST00000534374 PAK6Q9NQU5 681 aaPredicted RBP27.87■■■□□ 2.05
YIF1A-213ENST00000534374 M0R2C6 588 aa27.86■■■□□ 2.05
YIF1A-213ENST00000534374 CYP2B6P20813 491 aa27.86■■■□□ 2.05
YIF1A-213ENST00000534374 MORN1Q5T089 497 aa27.86■■■□□ 2.05
YIF1A-213ENST00000534374 TRMT44Q8IYL2 757 aaKnown RBP27.86■■■□□ 2.05
YIF1A-213ENST00000534374 VCPKMTQ9H867 229 aa27.86■■■□□ 2.05
YIF1A-213ENST00000534374 MINDY4BA8MYZ0 360 aa27.85■■■□□ 2.05
YIF1A-213ENST00000534374 APPP05067 770 aa27.85■■■□□ 2.05
YIF1A-213ENST00000534374 ZMYM1Q5SVZ6 1142 aa27.85■■■□□ 2.05
YIF1A-213ENST00000534374 UBE2Q1Q7Z7E8 422 aa27.85■■■□□ 2.05
YIF1A-213ENST00000534374 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
YIF1A-213ENST00000534374 MKNK2Q9HBH9 465 aa27.85■■■□□ 2.05
YIF1A-213ENST00000534374 BTBD7Q9P203 1132 aa27.85■■■□□ 2.05
YIF1A-213ENST00000534374 PLXNB2O15031 1838 aa27.84■■■□□ 2.05
YIF1A-213ENST00000534374 EEF2P13639 858 aaKnown RBP27.84■■■□□ 2.05
YIF1A-213ENST00000534374 KIAA1755Q5JYT7 1200 aa27.84■■■□□ 2.05
YIF1A-213ENST00000534374 IFNL3Q8IZI9 196 aa27.84■■■□□ 2.05
YIF1A-213ENST00000534374 NACAP1Q9BZK3 213 aa27.84■■■□□ 2.05
YIF1A-213ENST00000534374 ZNF287Q9HBT7 754 aa27.84■■■□□ 2.05
YIF1A-213ENST00000534374 EPB41L4AQ9HCS5 686 aaPredicted RBP27.84■■■□□ 2.05
YIF1A-213ENST00000534374 RPTORQ8N122 1335 aa27.84■■■□□ 2.05
YIF1A-213ENST00000534374 RGS2P41220 211 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 TDO2P48775 406 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 PDE1AP54750 535 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 TICAM2Q86XR7 235 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 CLEC10AQ8IUN9 316 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 MB21D1Q8N884 522 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 EVI5LQ96CN4 794 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 DEFB118Q96PH6 123 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.83■■■□□ 2.05
YIF1A-213ENST00000534374 TANGO6Q9C0B7 1094 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 CRISPLD2Q9H0B8 497 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 ROBO3Q96MS0 1386 aa27.83■■■□□ 2.05
YIF1A-213ENST00000534374 TFRCP02786 760 aaKnown RBP27.82■■■□□ 2.04
YIF1A-213ENST00000534374 RASA1P20936 1047 aa27.82■■■□□ 2.04
YIF1A-213ENST00000534374 DSG3P32926 999 aa27.82■■■□□ 2.04
YIF1A-213ENST00000534374 TRIB2Q92519 343 aa27.82■■■□□ 2.04
YIF1A-213ENST00000534374 SEC62Q99442 399 aaKnown RBP27.82■■■□□ 2.04
YIF1A-213ENST00000534374 CWC22Q9HCG8 908 aaKnown RBP27.82■■■□□ 2.04
YIF1A-213ENST00000534374 HMX1Q9NP08 348 aaPredicted RBP27.82■■■□□ 2.04
YIF1A-213ENST00000534374 CEP290O15078 2479 aa27.81■■■□□ 2.04
YIF1A-213ENST00000534374 WDR46O15213 610 aaKnown RBP27.81■■■□□ 2.04
YIF1A-213ENST00000534374 SMC5Q8IY18 1101 aa27.81■■■□□ 2.04
YIF1A-213ENST00000534374 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.81■■■□□ 2.049e-6■■■■■ 32.4
YIF1A-213ENST00000534374 SLC15A5A6NIM6 579 aa27.8■■■□□ 2.04
YIF1A-213ENST00000534374 PTPREP23469 700 aa27.8■■■□□ 2.04
YIF1A-213ENST00000534374 MAP2K5Q13163 448 aa27.8■■■□□ 2.04
YIF1A-213ENST00000534374 MAP3K21Q5TCX8 1036 aa27.8■■■□□ 2.04
YIF1A-213ENST00000534374 SPICE1Q8N0Z3 855 aa27.8■■■□□ 2.04
YIF1A-213ENST00000534374 GOPCQ9HD26 462 aa27.8■■■□□ 2.04
YIF1A-213ENST00000534374 FLOT1O75955 427 aa27.79■■■□□ 2.04
YIF1A-213ENST00000534374 ATP2B2Q01814 1243 aa27.79■■■□□ 2.04
YIF1A-213ENST00000534374 ZNF444Q8N0Y2 327 aaPredicted RBP27.79■■■□□ 2.04
YIF1A-213ENST00000534374 NYAP2Q9P242 653 aa27.79■■■□□ 2.04
YIF1A-213ENST00000534374 IVNS1ABPQ9Y6Y0 642 aa27.79■■■□□ 2.04
YIF1A-213ENST00000534374 RLFQ13129 1914 aa27.79■■■□□ 2.04
YIF1A-213ENST00000534374 STRNO43815 780 aa27.78■■■□□ 2.04
YIF1A-213ENST00000534374 ZKSCAN1P17029 563 aaPredicted RBP27.78■■■□□ 2.04
YIF1A-213ENST00000534374 TRIM32Q13049 653 aa27.78■■■□□ 2.04
YIF1A-213ENST00000534374 HABP4Q5JVS0 413 aaKnown RBP27.78■■■□□ 2.04
YIF1A-213ENST00000534374 SHCBP1Q8NEM2 672 aa27.78■■■□□ 2.04
YIF1A-213ENST00000534374 APBA2Q99767 749 aa27.78■■■□□ 2.04
YIF1A-213ENST00000534374 SPATC1LQ9H0A9 340 aa27.78■■■□□ 2.04
YIF1A-213ENST00000534374 FARP2O94887 1054 aaPredicted RBP27.77■■■□□ 2.04
YIF1A-213ENST00000534374 HOXC6P09630 235 aa27.77■■■□□ 2.04
YIF1A-213ENST00000534374 WDR78Q5VTH9 848 aa27.77■■■□□ 2.04
YIF1A-213ENST00000534374 STK11IPQ8N1F8 1099 aa27.77■■■□□ 2.04
YIF1A-213ENST00000534374 HTATIP2Q9BUP3 242 aa27.77■■■□□ 2.04
YIF1A-213ENST00000534374 MOV10L1Q9BXT6 1211 aaKnown RBP27.77■■■□□ 2.04
YIF1A-213ENST00000534374 NAPBQ9H115 298 aa27.77■■■□□ 2.04
YIF1A-213ENST00000534374 ADAMTS5Q9UNA0 930 aa27.77■■■□□ 2.04
YIF1A-213ENST00000534374 SLC3A2P08195 630 aaKnown RBP27.76■■■□□ 2.03
YIF1A-213ENST00000534374 GRB14Q14449 540 aa27.76■■■□□ 2.03
YIF1A-213ENST00000534374 EXOC6Q8TAG9 804 aa27.76■■■□□ 2.03
YIF1A-213ENST00000534374 LNPKQ9C0E8 428 aa27.76■■■□□ 2.03
YIF1A-213ENST00000534374 HELLSQ9NRZ9 838 aa27.76■■■□□ 2.03
YIF1A-213ENST00000534374 IGKV6D-41A0A0C4DH26 115 aa27.75■■■□□ 2.03
YIF1A-213ENST00000534374 PRKAR2AP13861 404 aaKnown RBP27.75■■■□□ 2.03
YIF1A-213ENST00000534374 PDE4BQ07343 736 aa27.75■■■□□ 2.03
YIF1A-213ENST00000534374 ANKLE1Q8NAG6 615 aa27.75■■■□□ 2.03
YIF1A-213ENST00000534374 MKL1Q969V6 931 aa27.75■■■□□ 2.03
YIF1A-213ENST00000534374 IGHDP01880 384 aa27.74■■■□□ 2.03
YIF1A-213ENST00000534374 CACNB2Q08289 660 aaPredicted RBP27.74■■■□□ 2.03
YIF1A-213ENST00000534374 CCL14Q16627 93 aa27.74■■■□□ 2.03
YIF1A-213ENST00000534374 DPF3Q92784 378 aa27.74■■■□□ 2.03
YIF1A-213ENST00000534374 ATG4CQ96DT6 458 aa27.74■■■□□ 2.03
YIF1A-213ENST00000534374 MROH8Q9H579 483 aa27.74■■■□□ 2.03
YIF1A-213ENST00000534374 SYNPO2Q9UMS6 1093 aa27.74■■■□□ 2.03
YIF1A-213ENST00000534374 GREB1LQ9C091 1923 aaPredicted RBP27.74■■■□□ 2.03
YIF1A-213ENST00000534374 ERCC3P19447 782 aa27.73■■■□□ 2.03
YIF1A-213ENST00000534374 PPARAQ07869 468 aa27.73■■■□□ 2.03
YIF1A-213ENST00000534374 F5H6K3 240 aa27.72■■■□□ 2.03
YIF1A-213ENST00000534374 PRDM1O75626 825 aa27.72■■■□□ 2.03
YIF1A-213ENST00000534374 NUCB1Q02818 461 aa27.72■■■□□ 2.03
YIF1A-213ENST00000534374 KLRC3Q07444 240 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms