RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NECAB2Q7Z6G3 386 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 TANGO6Q9C0B7 1094 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 ARHGEF10LQ9HCE6 1279 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 TMX2Q9Y320 296 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 IVNS1ABPQ9Y6Y0 642 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 SLC15A5A6NIM6 579 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 RNF113AO15541 343 aaKnown RBP10.69□□□□□ -0.7
COPB1-211ENST00000534234 PTPREP23469 700 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 ICA1Q05084 483 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 KIAA1755Q5JYT7 1200 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 C16orf86Q6ZW13 317 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 CLEC10AQ8IUN9 316 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 LPAR1Q92633 364 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 OSBP2Q969R2 916 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 SH2D4AQ9H788 454 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 GSG1L2A8MUP6 293 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 EVI5O60447 810 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 ZFYP08048 801 aaPredicted RBP10.69□□□□□ -0.7
COPB1-211ENST00000534234 EEF2P13639 858 aaKnown RBP10.69□□□□□ -0.7
COPB1-211ENST00000534234 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 DIS3LQ8TF46 1054 aaKnown RBP10.69□□□□□ -0.7
COPB1-211ENST00000534234 APPBP2Q92624 585 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 APBA2Q99767 749 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 VCPKMTQ9H867 229 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 ARPP21Q9UBL0 812 aaPredicted RBP10.69□□□□□ -0.7
COPB1-211ENST00000534234 OGDHLQ9ULD0 1010 aa10.69□□□□□ -0.7
COPB1-211ENST00000534234 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 MINDY4BA8MYZ0 360 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 ERC2O15083 957 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 STRNO43815 780 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 FLOT1O75955 427 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 DSG3P32926 999 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 RRP1P56182 461 aaKnown RBP10.68□□□□□ -0.7
COPB1-211ENST00000534234 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
COPB1-211ENST00000534234 SBK1Q52WX2 424 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 GIMAP6Q6P9H5 292 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 STK11IPQ8N1F8 1099 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 MOV10L1Q9BXT6 1211 aaKnown RBP10.68□□□□□ -0.7
COPB1-211ENST00000534234 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 MKNK2Q9HBH9 465 aa10.68□□□□□ -0.7
COPB1-211ENST00000534234 CDK5RAP2Q96SN8 1893 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
COPB1-211ENST00000534234 GPAA1O43292 621 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 APPP05067 770 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 HOXC6P09630 235 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 CCND3P30281 292 aaPredicted RBP10.67□□□□□ -0.7
COPB1-211ENST00000534234 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
COPB1-211ENST00000534234 GRB14Q14449 540 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 PLS1Q14651 629 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 MFSD14CQ5VZR4 134 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
COPB1-211ENST00000534234 MB21D1Q8N884 522 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 OTUD7AQ8TE49 926 aaPredicted RBP10.67□□□□□ -0.7
COPB1-211ENST00000534234 SPATC1LQ9H0A9 340 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 PCDH10Q9P2E7 1040 aa10.67□□□□□ -0.7
COPB1-211ENST00000534234 MYH1P12882 1939 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 MGAMO43451 1857 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
COPB1-211ENST00000534234 RAD21O60216 631 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 GNAT2P19087 354 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 ERCC3P19447 782 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 FXR1P51114 621 aaKnown RBP eCLIP10.66□□□□□ -0.77e-7■■■■■ 31
COPB1-211ENST00000534234 LHX8Q68G74 356 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 DPP9Q86TI2 863 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 SHCBP1Q8NEM2 672 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 NPLOC4Q8TAT6 608 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
COPB1-211ENST00000534234 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
COPB1-211ENST00000534234 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
COPB1-211ENST00000534234 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
COPB1-211ENST00000534234 M0R2C6 588 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 MX1P20591 662 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 RASA1P20936 1047 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 ADORA2AP29274 412 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 TDO2P48775 406 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 ANKRD45Q5TZF3 282 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 NCAPG2Q86XI2 1143 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 SEC62Q99442 399 aaKnown RBP10.65□□□□□ -0.7
COPB1-211ENST00000534234 FSD1Q9BTV5 496 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 MROH8Q9H579 483 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 C11orf49Q9H6J7 331 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
COPB1-211ENST00000534234 U3KPZ7 1027 aaPredicted RBP10.65□□□□□ -0.7
COPB1-211ENST00000534234 CNGA1P29973 690 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 CYP2C19P33261 490 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 TMEM132BQ14DG7 1078 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 ZNF444Q8N0Y2 327 aaPredicted RBP10.65□□□□□ -0.71
COPB1-211ENST00000534234 YTHDC1Q96MU7 727 aaKnown RBP10.65□□□□□ -0.71
COPB1-211ENST00000534234 NACAP1Q9BZK3 213 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 ZNF287Q9HBT7 754 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms