RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 IRAK1P51617 712 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 IKZF1Q13422 519 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 VWCEQ96DN2 955 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 ASPNQ9BXN1 380 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 DUSP15Q9H1R2 295 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 KCNH3Q9ULD8 1083 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 PPT2Q9UMR5 302 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 TNFRSF10CO14798 259 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 CCNFP41002 786 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 SOX9P48436 509 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 ZNF792Q3KQV3 632 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 CBLL1Q75N03 491 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 UBE2FQ969M7 185 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 CCSER2Q9H7U1 834 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 ZSWIM5Q9P217 1185 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 EFR3BQ9Y2G0 817 aa6.59□□□□□ -1.35
ATPAF1-211ENST00000534216 SRFP11831 508 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 CHMP4BP1P59074 171 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 ZP2Q05996 745 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 FBXW10Q5XX13 1052 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 RBBP8NLQ8NC74 664 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 PI4K2BQ8TCG2 481 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 SLC9A7Q96T83 725 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 GPR62Q9BZJ7 368 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 MBNL3Q9NUK0 354 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 ADAMTS6Q9UKP5 1117 aa6.58□□□□□ -1.36
ATPAF1-211ENST00000534216 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 ACRP10323 421 aa6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 RNF4P78317 190 aa6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 NBPF12Q5TAG4 269 aaPredicted RBP6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 SLC23A3Q6PIS1 610 aa6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 TRIT1Q9H3H1 467 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 PRDM7Q9NQW5 492 aa6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
ATPAF1-211ENST00000534216 WASH4PA8MWX3 477 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 CLEC3AO75596 197 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 GAB4Q2WGN9 574 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 CCDC81Q6ZN84 652 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 TMPRSS7Q7RTY8 843 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 TMEM192Q8IY95 271 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
ATPAF1-211ENST00000534216 E9PSI1 815 aa6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 ESR1P03372 595 aa6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 TAL1P17542 331 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 TPP2P29144 1249 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 NASPP49321 788 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 RUFY4Q6ZNE9 571 aa6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 TSPYL5Q86VY4 417 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 LSRQ86X29 649 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 SEC16BQ96JE7 1060 aa6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 SLC6A18Q96N87 628 aa6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 CRBNQ96SW2 442 aa6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 RC3H2Q9HBD1 1191 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-211ENST00000534216 SHISA3A0PJX4 238 aa6.54□□□□□ -1.36
ATPAF1-211ENST00000534216 NBPF9Q3BBW0 867 aa6.54□□□□□ -1.36
ATPAF1-211ENST00000534216 LRRN4CLQ8ND94 238 aa6.54□□□□□ -1.36
ATPAF1-211ENST00000534216 ZNF512BQ96KM6 892 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-211ENST00000534216 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-211ENST00000534216 IGSF5Q9NSI5 407 aa6.54□□□□□ -1.36
ATPAF1-211ENST00000534216 FAM86C2PA6NEL3 165 aa6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 ITGB5P18084 799 aa6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 GUCY2CP25092 1073 aa6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 GIPRP48546 466 aa6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 EIF6P56537 245 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 CREG2Q8IUH2 290 aa6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 DHRS1Q96LJ7 313 aa6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-211ENST00000534216 NMIQ13287 307 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 SNW1Q13573 536 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 ZYXQ15942 572 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 CLEC16AQ2KHT3 1053 aa6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 UNC5AQ6ZN44 842 aa6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 TMC3Q7Z5M5 1100 aa6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 ENOX1Q8TC92 643 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 ASCC2Q9H1I8 757 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
ATPAF1-211ENST00000534216 ATF4P18848 351 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 EGR3Q06889 387 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 ATG4DQ86TL0 474 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 OR6P1Q8NGX9 317 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 SYTL5Q8TDW5 730 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 SHDQ96IW2 340 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 ALPK1Q96QP1 1244 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 HDAC8Q9BY41 377 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 PRDM14Q9GZV8 571 aa6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 MKRN2Q9H000 416 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-211ENST00000534216 CAPN10Q9HC96 672 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms