RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
CMTM1-219ENST00000533953 ERICH6BQ5W0A0 696 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 CATSPERGQ6ZRH7 1159 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 LRRC47Q8N1G4 583 aaKnown RBP15.88■□□□□ 0.13
CMTM1-219ENST00000533953 TRIM47Q96LD4 638 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 EFCC1Q9HA90 598 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 ZNF287Q9HBT7 754 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 MTMR4Q9NYA4 1195 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 RBPJLQ9UBG7 517 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 PNMA3Q9UL41 463 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 TAF6LQ9Y6J9 622 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 ORC4O43929 436 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 FGRP09769 529 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 PSMC4P43686 418 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 HERVK_113P62684 666 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 Q3C1V9 767 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 AKNAD1Q5T1N1 836 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 ABHD8Q96I13 439 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 ESYT1Q9BSJ8 1104 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 FBXO28Q9NVF7 368 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 NYAP2Q9P242 653 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 PTPRFP10586 1907 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 NEDD4P46934 1319 aa15.87■□□□□ 0.13
CMTM1-219ENST00000533953 F5H6K3 240 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 FMNL1O95466 1100 aaPredicted RBP15.86■□□□□ 0.13
CMTM1-219ENST00000533953 KLRC3Q07444 240 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 FAM83BQ5T0W9 1011 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 MFSD6Q6ZSS7 791 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 STAG1Q8WVM7 1258 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 ZKSCAN3Q9BRR0 538 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 MTMR7Q9Y216 660 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 ZMYM6O95789 1325 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 RAD50Q92878 1312 aa15.86■□□□□ 0.13
CMTM1-219ENST00000533953 CNMDO75829 334 aa15.85■□□□□ 0.13
CMTM1-219ENST00000533953 NDUFB10O96000 172 aa15.85■□□□□ 0.13
CMTM1-219ENST00000533953 KIF22Q14807 665 aa15.85■□□□□ 0.13
CMTM1-219ENST00000533953 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
CMTM1-219ENST00000533953 RASGRP2Q7LDG7 609 aa15.85■□□□□ 0.13
CMTM1-219ENST00000533953 B4E1Z4 1266 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 TTLL1O95922 423 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 GCLCP48506 637 aaPredicted RBP15.84■□□□□ 0.13
CMTM1-219ENST00000533953 MKL1Q969V6 931 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 LSG1Q9H089 658 aaKnown RBP15.84■□□□□ 0.13
CMTM1-219ENST00000533953 SH2D4AQ9H788 454 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 GOPCQ9HD26 462 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 BTBD7Q9P203 1132 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 CTNNA3Q9UI47 895 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 GABRQQ9UN88 632 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 PTPN22Q9Y2R2 807 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 LOC285556D6RIA3 1793 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 ZSWIM8A7E2V4 1837 aa15.84■□□□□ 0.13
CMTM1-219ENST00000533953 SPDYE16A6NNV3 312 aaPredicted RBP15.83■□□□□ 0.12
CMTM1-219ENST00000533953 KDM4AO75164 1064 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 FLOT1O75955 427 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 CYP21A2P08686 494 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 COG2Q14746 738 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 FAM110CQ1W6H9 321 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 GPRC5AQ8NFJ5 357 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 LPAR1Q92633 364 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 MAP4K1Q92918 833 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 ATG4CQ96DT6 458 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 PORCNQ9H237 461 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 HPS5Q9UPZ3 1129 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 RBM8AQ9Y5S9 174 aaKnown RBP15.83■□□□□ 0.12
CMTM1-219ENST00000533953 PTCH2Q9Y6C5 1203 aa15.83■□□□□ 0.12
CMTM1-219ENST00000533953 WDR46O15213 610 aaKnown RBP15.82■□□□□ 0.12
CMTM1-219ENST00000533953 CDC45O75419 566 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 MCCP23508 829 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 DSG3P32926 999 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 FCGRTP55899 365 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 FBXO46Q6PJ61 603 aaPredicted RBP15.82■□□□□ 0.12
CMTM1-219ENST00000533953 KIAA1211Q6ZU35 1233 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 STOX1Q6ZVD7 989 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 RNF41Q9H4P4 317 aaPredicted RBP15.82■□□□□ 0.12
CMTM1-219ENST00000533953 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 ZSWIM5Q9P217 1185 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 MORF4L1Q9UBU8 362 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
CMTM1-219ENST00000533953 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
CMTM1-219ENST00000533953 PLIN4Q96Q06 1357 aa15.82■□□□□ 0.12
CMTM1-219ENST00000533953 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 TNPO2O14787 897 aaKnown RBP15.81■□□□□ 0.12
CMTM1-219ENST00000533953 MYCP01106 439 aaPredicted RBP15.81■□□□□ 0.12
CMTM1-219ENST00000533953 ERVK-9P63128 1117 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 ERVK-24P63145 666 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 PRKCZQ05513 592 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 COL9A3Q14050 684 aaPredicted RBP15.81■□□□□ 0.12
CMTM1-219ENST00000533953 RCSD1Q6JBY9 416 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 ESR2Q92731 530 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 TMEM47Q9BQJ4 181 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 SRRDQ9UH36 339 aa15.81■□□□□ 0.12
CMTM1-219ENST00000533953 PKN2Q16513 984 aaKnown RBP15.8■□□□□ 0.12
CMTM1-219ENST00000533953 CYB5R4Q7L1T6 521 aa15.8■□□□□ 0.12
CMTM1-219ENST00000533953 CHST3Q7LGC8 479 aa15.8■□□□□ 0.12
CMTM1-219ENST00000533953 HOXC10Q9NYD6 342 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms