RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 NLRP5P59047 1200 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 PSMD2Q13200 908 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 C11orf57Q6ZUT1 292 aaPredicted RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 H2AFVQ71UI9 128 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 DDX46Q7L014 1031 aaKnown RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 CCDC197Q8NCU1 140 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 LZICQ8WZA0 190 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 CTNNAL1Q9UBT7 734 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 TMEM2Q9UHN6 1383 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 PARP3Q9Y6F1 533 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 IQGAP3Q86VI3 1631 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 LRRC10BA6NIK2 292 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 IDH1O75874 414 aaKnown RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 TBC1D8O95759 1140 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 KRT2P35908 639 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 CABP4P57796 275 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 GSTO1P78417 241 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 KCNB1Q14721 858 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 RPS6KA1Q15418 735 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 PDCD2Q16342 344 aaPredicted RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 MICU3Q86XE3 530 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 MAGEC3Q8TD91 643 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 SMC6Q96SB8 1091 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 TANGO6Q9C0B7 1094 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 DONSONQ9NYP3 566 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 KLHL14Q9P2G3 628 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 THEGQ9P2T0 379 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 FHOD1Q9Y613 1164 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 E7EWF7 191 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 ZWINTO95229 277 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 HOXC9P31274 260 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 COPB1P53618 953 aaKnown RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 ATP11AP98196 1134 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 CRELD2Q6UXH1 353 aaPredicted RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 TEX11Q8IYF3 940 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 C17orf53Q8N3J3 647 aaPredicted RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 SLC26A6Q9BXS9 759 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 EHMT1Q9H9B1 1298 aa4.5□□□□□ -1.69
SOX6-217ENST00000533870 SRPRBQ9Y5M8 271 aaKnown RBP4.5□□□□□ -1.69
SOX6-217ENST00000533870 SMAPO00193 183 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 RFX1P22670 979 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 STAT6P42226 847 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 TTC38Q5R3I4 469 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 KLHL10Q6JEL2 608 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 G2E3Q7L622 706 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SGSM3Q96HU1 749 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 FANCLQ9NW38 375 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CAPN7Q9Y6W3 813 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 NEXMIFQ5QGS0 1516 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 EFCAB6Q5THR3 1501 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 RNMTO43148 476 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 SUN1O94901 812 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 POLR3DP05423 398 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 GHRP10912 638 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 NONOQ15233 471 aaKnown RBP eCLIP4.49□□□□□ -1.69
SOX6-217ENST00000533870 BTNL9Q6UXG8 535 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 RASGRP2Q7LDG7 609 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 HS2ST1Q7LGA3 356 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CSGALNACT2Q8N6G5 542 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 IFIH1Q9BYX4 1025 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 CRNKL1Q9BZJ0 848 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 DNAI2Q9GZS0 605 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SENP1Q9P0U3 644 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 UBN2Q6ZU65 1347 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 PPP1R12AO14974 1030 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 NR1I2O75469 434 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 ZNF189O75820 626 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 RHOXF2BP0C7M4 288 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 GCFC2P16383 781 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 UBXN1Q04323 297 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SEPT7Q16181 437 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 DPCR1Q3MIW9 517 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CCDC144BQ3MJ40 725 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 RABL6Q3YEC7 729 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 APOA5Q6Q788 366 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CEP57Q86XR8 500 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 DZIP3Q86Y13 1208 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 CCDC144CPQ8IYA2 1237 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CPLX3Q8WVH0 158 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CEP63Q96MT8 703 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 RAB3IPQ96QF0 476 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 RHOXF2Q9BQY4 288 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 DBNDD2Q9BQY9 259 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SPZ1Q9BXG8 430 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CHPF2Q9P2E5 772 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 PA2G4Q9UQ80 394 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 SMTNP53814 917 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 ASIC1P78348 528 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CCT2P78371 535 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 BYSLQ13895 437 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 CCDC6Q16204 474 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 BEND6Q5SZJ8 279 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 AKNAD1Q5T1N1 836 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 HAUS3Q68CZ6 603 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 LDHAL6AQ6ZMR3 332 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 TRIM42Q8IWZ5 723 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 RNF168Q8IYW5 571 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 XAGE3Q8WTP9 111 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 ZNF512BQ96KM6 892 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms