RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 HOXA7P31268 230 aaPredicted RBP19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 PABPC4Q13310 644 aaKnown RBP eCLIP19.37■□□□□ 0.698e-7■■■■■ 45.2
PACSIN3-210ENST00000533686 RCSD1Q6JBY9 416 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 CYB5R4Q7L1T6 521 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 NEK1Q96PY6 1258 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 ZSCAN10Q96SZ4 725 aaPredicted RBP19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 CFHR5Q9BXR6 569 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 GOPCQ9HD26 462 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 RNF186Q9NXI6 227 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 SAGE1Q9NXZ1 904 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 SNX14Q9Y5W7 946 aa19.37■□□□□ 0.69
PACSIN3-210ENST00000533686 CA12O43570 354 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 TOP1P11387 765 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 DGKZQ13574 1117 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 ZYXQ15942 572 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 TREML2Q5T2D2 321 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 GMCL1P1Q8NEA9 526 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 ZKSCAN3Q9BRR0 538 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 UBAC1Q9BSL1 405 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 BEGAINQ9BUH8 593 aa19.36■□□□□ 0.69
PACSIN3-210ENST00000533686 F5H6K3 240 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 PDHXO00330 501 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 HMGB1P09429 215 aaKnown RBP19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 VCAM1P19320 739 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 MCM5P33992 734 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 KLRC3Q07444 240 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 SART3Q15020 963 aaKnown RBP19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 ADCK5Q3MIX3 580 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 TMEM47Q9BQJ4 181 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 PTPRFP10586 1907 aa19.35■□□□□ 0.69
PACSIN3-210ENST00000533686 TNKSO95271 1327 aa19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 WDR46O15213 610 aaKnown RBP19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 ANTXR2P58335 489 aa19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 SEC23AQ15436 765 aa19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 KIAA1755Q5JYT7 1200 aa19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 LRRC47Q8N1G4 583 aaKnown RBP19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 ENAHQ8N8S7 591 aaPredicted RBP19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 PNMA3Q9UL41 463 aa19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 LOC285556D6RIA3 1793 aa19.34■□□□□ 0.69
PACSIN3-210ENST00000533686 WDR19Q8NEZ3 1342 aa19.33■□□□□ 0.69
PACSIN3-210ENST00000533686 ERICH2A1L162 156 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L15C9J2P7 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L13C9JLJ4 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L11C9JVI0 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L18D6R9N7 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L22D6RA61 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L17D6RBQ6 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L19D6RCP7 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L20D6RJB6 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 IFIT3O14879 490 aaKnown RBP19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 PRC1O43663 620 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 NDUFB10O96000 172 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 OSBPP22059 807 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 PSMA5P28066 241 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 ANAPC15P60006 121 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 USP17L24Q0WX57 530 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 IGDCC4Q8TDY8 1250 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.68
PACSIN3-210ENST00000533686 TRPA1O75762 1119 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 EXOSC10Q01780 885 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 TAF1CQ15572 869 aaPredicted RBP19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 IFIT1BQ5T764 474 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 SLFN13Q68D06 897 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 CATSPERGQ6ZRH7 1159 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 CHST3Q7LGC8 479 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 SPICE1Q8N0Z3 855 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 IL17RAQ96F46 866 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 GMCL1Q96IK5 515 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 TMEM87BQ96K49 555 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 JAKMIP1Q96N16 626 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 PARK7Q99497 189 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 TM6SF1Q9BZW5 370 aa19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 RPAP3Q9H6T3 665 aaPredicted RBP19.32■□□□□ 0.68
PACSIN3-210ENST00000533686 COL9A3Q14050 684 aaPredicted RBP19.31■□□□□ 0.68
PACSIN3-210ENST00000533686 TMEM67Q5HYA8 995 aa19.31■□□□□ 0.68
PACSIN3-210ENST00000533686 TMTC2Q8N394 836 aa19.31■□□□□ 0.68
PACSIN3-210ENST00000533686 ASCC2Q9H1I8 757 aaPredicted RBP19.31■□□□□ 0.68
PACSIN3-210ENST00000533686 KAT14Q9H8E8 782 aa19.31■□□□□ 0.68
PACSIN3-210ENST00000533686 RAD21O60216 631 aa19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 IRX3P78415 501 aaPredicted RBP19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 CRHR2Q13324 411 aa19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 WTAPQ15007 396 aa19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 BLOC1S2Q6QNY1 142 aa19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 PNMA1Q8ND90 353 aa19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 DCAF4Q8WV16 495 aa19.3■□□□□ 0.68
PACSIN3-210ENST00000533686 SH2B2O14492 632 aaPredicted RBP19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 TLR2O60603 784 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 CYP2C8P10632 490 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 BMP3P12645 472 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 LIFRP42702 1097 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 SLC1A4P43007 532 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 COG2Q14746 738 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 NOM1Q5C9Z4 860 aaKnown RBP19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 GTF3C2Q8WUA4 911 aaPredicted RBP19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 P2RX7Q99572 595 aaKnown RBP19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 BACH2Q9BYV9 841 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 LY9Q9HBG7 655 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 ZSWIM6Q9HCJ5 1215 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms