RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 BACE1P56817 501 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 MTMR2Q13614 643 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 SPRYD7Q5W111 196 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 RASAL3Q86YV0 1011 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 IL27Q8NEV9 243 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 SH2D4AQ9H788 454 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 PHIPQ8WWQ0 1821 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 F5H6K3 240 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 ST18O60284 1047 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 CD2BP2O95400 341 aaKnown RBP13.95□□□□□ -0.18
COMMD9-208ENST00000533643 NDUFB10O96000 172 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 EVCP57679 992 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 KLRC3Q07444 240 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 MKRN3Q13064 507 aaKnown RBP13.95□□□□□ -0.18
COMMD9-208ENST00000533643 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 ZYXQ15942 572 aaKnown RBP13.95□□□□□ -0.18
COMMD9-208ENST00000533643 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 CATIPQ7Z7H3 387 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 GMCL1P1Q8NEA9 526 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 FEZ1Q99689 392 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 VCPKMTQ9H867 229 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 GOPCQ9HD26 462 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
COMMD9-208ENST00000533643 A0A0G2JLL6 359 aaPredicted RBP13.94□□□□□ -0.18
COMMD9-208ENST00000533643 RASSF10A6NK89 507 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 FAM155AB1AL88 458 aaPredicted RBP13.94□□□□□ -0.18
COMMD9-208ENST00000533643 C19orf81C9J6K1 198 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 SLC10A3P09131 477 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 ZBTB48P10074 688 aaPredicted RBP13.94□□□□□ -0.18
COMMD9-208ENST00000533643 USP14P54578 494 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 HMGCS2P54868 508 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 TROAPQ12815 778 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 DGKZQ13574 1117 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 SLFN13Q68D06 897 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 NOL8Q76FK4 1167 aaKnown RBP13.94□□□□□ -0.18
COMMD9-208ENST00000533643 RASGRP2Q7LDG7 609 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 PRRT2Q7Z6L0 340 aaPredicted RBP13.94□□□□□ -0.18
COMMD9-208ENST00000533643 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 CCDC102AQ96A19 550 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 HPS5Q9UPZ3 1129 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 MTMR7Q9Y216 660 aa13.94□□□□□ -0.18
COMMD9-208ENST00000533643 ZBTB43O43298 467 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 RAD21O60216 631 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 DDAH1O94760 285 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 PDIA3P30101 505 aaKnown RBP13.93□□□□□ -0.18
COMMD9-208ENST00000533643 C1QTNF8P60827 252 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 MOGSQ13724 837 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 SYNE3Q6ZMZ3 975 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 ZNF274Q96GC6 653 aaPredicted RBP13.93□□□□□ -0.18
COMMD9-208ENST00000533643 C12orf42Q96LP6 360 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
COMMD9-208ENST00000533643 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
COMMD9-208ENST00000533643 LIMCH1Q9UPQ0 1083 aa13.93□□□□□ -0.18
COMMD9-208ENST00000533643 GOLGA8BA8MQT2 603 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 PDHBP11177 359 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 RXRAP19793 462 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 GTF2A2P52657 109 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 HTRA3P83110 453 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 GRM4Q14833 912 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 DEFB115Q30KQ5 88 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 CYP4F22Q6NT55 531 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 MICU3Q86XE3 530 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 LPAR1Q92633 364 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 MAP3K14Q99558 947 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
COMMD9-208ENST00000533643 PFKFB2O60825 505 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 LARGE1O95461 756 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 CALM1P0DP23 149 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 CALM2P0DP24 149 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 CALM3P0DP25 149 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 CETPP11597 493 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 VCAM1P19320 739 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 RCAN1P53805 252 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 ME3Q16798 604 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 GADL1Q6ZQY3 521 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
COMMD9-208ENST00000533643 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
COMMD9-208ENST00000533643 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
COMMD9-208ENST00000533643 BRI3BPQ8WY22 251 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms