RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 ASNSP08243 561 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 EEF2P13639 858 aaKnown RBP15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 MAP2K2P36507 400 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 ICA1Q05084 483 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 WTAPQ15007 396 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 RASGRP2Q7LDG7 609 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 ANKS1AQ92625 1134 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 MS4A4AQ96JQ5 239 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 KANSL2Q9H9L4 492 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 CWC22Q9HCG8 908 aaKnown RBP15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 CABP5Q9NP86 173 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 TPCN1Q9ULQ1 816 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 STX8Q9UNK0 236 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 LARGE1O95461 756 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 LIFRP42702 1097 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 PPATQ06203 517 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 PPIL2Q13356 520 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 SGMS1Q86VZ5 419 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 DGKHQ86XP1 1220 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 ACER1Q8TDN7 264 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 TMEM47Q9BQJ4 181 aa15.72■□□□□ 0.11
TRAPPC4-214ENST00000533632 LOC285556D6RIA3 1793 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 TTLL1O95922 423 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 DDIT3P35638 169 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 FGD1P98174 961 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 MYL10Q9BUA6 226 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 CLIP2Q9UDT6 1046 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 KCNH4Q9UQ05 1017 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.11
TRAPPC4-214ENST00000533632 EVCP57679 992 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 MOGSQ13724 837 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 INTS4Q96HW7 963 aaKnown RBP15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 NYAP2Q9P242 653 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 ZHX2Q9Y6X8 837 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 KLF18A0A0U1RQI7 1052 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 ERICH2A1L162 156 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 TESPA1A2RU30 521 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 APOA5Q6Q788 366 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 TMX3Q96JJ7 454 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 PTPN18Q99952 460 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 HPS5Q9UPZ3 1129 aa15.7■□□□□ 0.1
TRAPPC4-214ENST00000533632 USP17L5A8MUK1 530 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 TOP1P11387 765 aaKnown RBP15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 RXRAP19793 462 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 TM4SF4P48230 202 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 ST3GAL1Q11201 340 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 DGKZQ13574 1117 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 CUL4AQ13619 759 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 ME3Q16798 604 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 KIAA1755Q5JYT7 1200 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 ZNF654Q8IZM8 581 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 BRI3BPQ8WY22 251 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 MKL1Q969V6 931 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 CHMP4CQ96CF2 233 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
TRAPPC4-214ENST00000533632 IGF2BP3O00425 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 TROAPQ12815 778 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 CCDC178Q5BJE1 867 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 NFXL1Q6ZNB6 911 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 PNMA1Q8ND90 353 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 ANP32EQ9BTT0 268 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 KAT14Q9H8E8 782 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 WBP1LQ9NX94 342 aa15.68■□□□□ 0.1
TRAPPC4-214ENST00000533632 MANSC4A6NHS7 340 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 CCDC69A6NI79 296 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 PDIA3P30101 505 aaKnown RBP15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 MICU3Q86XE3 530 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 WDR18Q9BV38 432 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 SH2B1Q9NRF2 756 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 MTMR7Q9Y216 660 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 TMX2Q9Y320 296 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 CXCL11O14625 94 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 SPP2Q13103 211 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 ZYXQ15942 572 aaKnown RBP15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 TMTC2Q8N394 836 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 SLC12A7Q9Y666 1083 aa15.67■□□□□ 0.1
TRAPPC4-214ENST00000533632 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 A0A0G2JLL6 359 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 TRIM75PA6NK02 468 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 DTNBO60941 627 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 GTF2A2P52657 109 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 STK3Q13188 491 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 SNAPC2Q13487 334 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 MTMR2Q13614 643 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 CCL15Q16663 113 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 PRRT2Q7Z6L0 340 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 NECAB1Q8N987 351 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms