RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 STX8Q9UNK0 236 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 MYH4Q9Y623 1939 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 FOXN1O15353 648 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
SF3B2-214ENST00000533595 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 ZKSCAN1P17029 563 aaPredicted RBP17.18■□□□□ 0.34
SF3B2-214ENST00000533595 VCAM1P19320 739 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 CRHR2Q13324 411 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 PARK7Q99497 189 aaKnown RBP17.18■□□□□ 0.34
SF3B2-214ENST00000533595 ZFYVE28Q9HCC9 887 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 PNMA3Q9UL41 463 aa17.18■□□□□ 0.34
SF3B2-214ENST00000533595 RAD21O60216 631 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 OSBPP22059 807 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
SF3B2-214ENST00000533595 HSPA4P34932 840 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 NOVP48745 357 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 KIAA1755Q5JYT7 1200 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 COL13A1Q5TAT6 717 aaPredicted RBP17.17■□□□□ 0.34
SF3B2-214ENST00000533595 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
SF3B2-214ENST00000533595 TTC14Q96N46 770 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 ZKSCAN3Q9BRR0 538 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 UBAC1Q9BSL1 405 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 USP26Q9BXU7 913 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L15C9J2P7 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L13C9JLJ4 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L11C9JVI0 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L18D6R9N7 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L22D6RA61 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L17D6RBQ6 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L19D6RCP7 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L20D6RJB6 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 F5H6K3 240 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 CYP2C8P10632 490 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 CTCFP49711 727 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-214ENST00000533595 IRX3P78415 501 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-214ENST00000533595 KLRC3Q07444 240 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 USP17L24Q0WX57 530 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 CYB5R4Q7L1T6 521 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-214ENST00000533595 ASCC2Q9H1I8 757 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-214ENST00000533595 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
SF3B2-214ENST00000533595 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-214ENST00000533595 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
SF3B2-214ENST00000533595 TOP1P11387 765 aaKnown RBP17.15■□□□□ 0.34
SF3B2-214ENST00000533595 KRT32Q14532 448 aa17.15■□□□□ 0.34
SF3B2-214ENST00000533595 RCSD1Q6JBY9 416 aa17.15■□□□□ 0.34
SF3B2-214ENST00000533595 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
SF3B2-214ENST00000533595 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
SF3B2-214ENST00000533595 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
SF3B2-214ENST00000533595 SMCR8Q8TEV9 937 aaPredicted RBP17.15■□□□□ 0.34
SF3B2-214ENST00000533595 KCNB2Q92953 911 aa17.15■□□□□ 0.34
SF3B2-214ENST00000533595 TLR2O60603 784 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 NDUFB10O96000 172 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 HSPA8P11142 646 aaKnown RBP17.14■□□□□ 0.33
SF3B2-214ENST00000533595 MCCP23508 829 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 C8orf34Q49A92 452 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 CATSPERGQ6ZRH7 1159 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 ENAHQ8N8S7 591 aaPredicted RBP17.14■□□□□ 0.33
SF3B2-214ENST00000533595 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 TNKSO95271 1327 aa17.14■□□□□ 0.33
SF3B2-214ENST00000533595 ERICH2A1L162 156 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 GPR25O00155 361 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
SF3B2-214ENST00000533595 MCM5P33992 734 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
SF3B2-214ENST00000533595 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
SF3B2-214ENST00000533595 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 SLFN13Q68D06 897 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 ANKS1AQ92625 1134 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
SF3B2-214ENST00000533595 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 ADGRA2Q96PE1 1338 aa17.13■□□□□ 0.33
SF3B2-214ENST00000533595 PRC1O43663 620 aa17.12■□□□□ 0.33
SF3B2-214ENST00000533595 LBX1P52954 281 aa17.12■□□□□ 0.33
SF3B2-214ENST00000533595 ANTXR2P58335 489 aa17.12■□□□□ 0.33
SF3B2-214ENST00000533595 HERVK_113P62684 666 aa17.12■□□□□ 0.33
SF3B2-214ENST00000533595 IFIT1BQ5T764 474 aaKnown RBP17.12■□□□□ 0.33
SF3B2-214ENST00000533595 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
SF3B2-214ENST00000533595 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
SF3B2-214ENST00000533595 CPA4Q9UI42 421 aa17.12■□□□□ 0.33
SF3B2-214ENST00000533595 FLOT1O75955 427 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 SEC24BO95487 1268 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 GCLCP48506 637 aaPredicted RBP17.11■□□□□ 0.33
SF3B2-214ENST00000533595 COG2Q14746 738 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 SEC23AQ15436 765 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 ADCK5Q3MIX3 580 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 C17orf99Q6UX52 265 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 GTF3C2Q8WUA4 911 aaPredicted RBP17.11■□□□□ 0.33
SF3B2-214ENST00000533595 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 HOXC10Q9NYD6 342 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms