RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 TANGO6Q9C0B7 1094 aa26.42■■□□□ 1.82
SIPA1-208ENST00000533361 VCPKMTQ9H867 229 aa26.42■■□□□ 1.82
SIPA1-208ENST00000533361 GOPCQ9HD26 462 aa26.42■■□□□ 1.82
SIPA1-208ENST00000533361 CLIP2Q9UDT6 1046 aa26.42■■□□□ 1.82
SIPA1-208ENST00000533361 ZMYM6O95789 1325 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 TSPY2A6NKD2 308 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 RANBP6O60518 1105 aaKnown RBP26.41■■□□□ 1.82
SIPA1-208ENST00000533361 GNRH1P01148 92 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 RRP12Q5JTH9 1297 aaKnown RBP26.41■■□□□ 1.82
SIPA1-208ENST00000533361 NEDD1Q8NHV4 660 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 LPAR1Q92633 364 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 TRIM47Q96LD4 638 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 PAGR1Q9BTK6 254 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 NYAP2Q9P242 653 aa26.41■■□□□ 1.82
SIPA1-208ENST00000533361 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.41■■□□□ 1.82
SIPA1-208ENST00000533361 ZNF213O14771 459 aa26.4■■□□□ 1.82
SIPA1-208ENST00000533361 CTGFP29279 349 aa26.4■■□□□ 1.82
SIPA1-208ENST00000533361 KIAA1755Q5JYT7 1200 aa26.4■■□□□ 1.82
SIPA1-208ENST00000533361 GTF3C2Q8WUA4 911 aaPredicted RBP26.4■■□□□ 1.82
SIPA1-208ENST00000533361 DSCC1Q9BVC3 393 aa26.4■■□□□ 1.82
SIPA1-208ENST00000533361 RAD50Q92878 1312 aa26.39■■□□□ 1.82
SIPA1-208ENST00000533361 SAMD1Q6SPF0 538 aaPredicted RBP26.39■■□□□ 1.82
SIPA1-208ENST00000533361 CEP95Q96GE4 821 aa26.39■■□□□ 1.82
SIPA1-208ENST00000533361 ZSWIM8A7E2V4 1837 aa26.39■■□□□ 1.81
SIPA1-208ENST00000533361 IGKV6D-41A0A0C4DH26 115 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 TNPO2O14787 897 aaKnown RBP26.38■■□□□ 1.81
SIPA1-208ENST00000533361 ORC4O43929 436 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 PEX10O60683 326 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 MFSD6Q6ZSS7 791 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 GPRC5AQ8NFJ5 357 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 IL25Q9H293 177 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 MTMR4Q9NYA4 1195 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 RBPJLQ9UBG7 517 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 CTNNA3Q9UI47 895 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 TACC3Q9Y6A5 838 aa26.38■■□□□ 1.81
SIPA1-208ENST00000533361 WDR46O15213 610 aaKnown RBP26.37■■□□□ 1.81
SIPA1-208ENST00000533361 TTLL1O95922 423 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 PRMT2P55345 433 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 COG2Q14746 738 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 CCAR1Q8IX12 1150 aaKnown RBP26.37■■□□□ 1.81
SIPA1-208ENST00000533361 HOXC10Q9NYD6 342 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 MORF4L1Q9UBU8 362 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 SRRDQ9UH36 339 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 PTCH2Q9Y6C5 1203 aa26.37■■□□□ 1.81
SIPA1-208ENST00000533361 IMMTQ16891 758 aaKnown RBP26.36■■□□□ 1.81
SIPA1-208ENST00000533361 AKNAD1Q5T1N1 836 aa26.36■■□□□ 1.81
SIPA1-208ENST00000533361 COA7Q96BR5 231 aa26.36■■□□□ 1.81
SIPA1-208ENST00000533361 RNF41Q9H4P4 317 aaPredicted RBP26.36■■□□□ 1.81
SIPA1-208ENST00000533361 TXNRD2Q9NNW7 524 aa26.36■■□□□ 1.81
SIPA1-208ENST00000533361 PPP4R2Q9NY27 417 aa26.36■■□□□ 1.81
SIPA1-208ENST00000533361 MYPNQ86TC9 1320 aa26.36■■□□□ 1.81
SIPA1-208ENST00000533361 GREB1LQ9C091 1923 aaPredicted RBP26.35■■□□□ 1.81
SIPA1-208ENST00000533361 FLOT1O75955 427 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 FGRP09769 529 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 PPP4R3BQ5MIZ7 849 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 ERICH6BQ5W0A0 696 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 RAET1EQ8TD07 263 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 STX8Q9UNK0 236 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 RABGAP1Q9Y3P9 1069 aa26.35■■□□□ 1.81
SIPA1-208ENST00000533361 PLIN4Q96Q06 1357 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 SPDYE16A6NNV3 312 aaPredicted RBP26.34■■□□□ 1.81
SIPA1-208ENST00000533361 F5H6K3 240 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 ERVK-9P63128 1117 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 ERVK-24P63145 666 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 KLRC3Q07444 240 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 FAM83BQ5T0W9 1011 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 TBC1D10CQ8IV04 446 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 LRRC47Q8N1G4 583 aaKnown RBP26.34■■□□□ 1.81
SIPA1-208ENST00000533361 STAG1Q8WVM7 1258 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 MKL1Q969V6 931 aa26.34■■□□□ 1.81
SIPA1-208ENST00000533361 CWC22Q9HCG8 908 aaKnown RBP26.34■■□□□ 1.81
SIPA1-208ENST00000533361 SGSM2O43147 1006 aa26.33■■□□□ 1.81
SIPA1-208ENST00000533361 PCP11498 1178 aaKnown RBP26.33■■□□□ 1.81
SIPA1-208ENST00000533361 PRKCZQ05513 592 aa26.33■■□□□ 1.81
SIPA1-208ENST00000533361 Q3C1V9 767 aa26.33■■□□□ 1.81
SIPA1-208ENST00000533361 BMP2KLQ5H9B9 411 aa26.33■■□□□ 1.81
SIPA1-208ENST00000533361 NBPF3Q9H094 633 aa26.33■■□□□ 1.81
SIPA1-208ENST00000533361 MGAMO43451 1857 aa26.32■■□□□ 1.8
SIPA1-208ENST00000533361 NMT2O60551 498 aa26.32■■□□□ 1.8
SIPA1-208ENST00000533361 DSG3P32926 999 aa26.32■■□□□ 1.8
SIPA1-208ENST00000533361 SLC9C1Q4G0N8 1177 aa26.32■■□□□ 1.8
SIPA1-208ENST00000533361 ISY1Q9ULR0 285 aaKnown RBP26.32■■□□□ 1.8
SIPA1-208ENST00000533361 GABRQQ9UN88 632 aa26.32■■□□□ 1.8
SIPA1-208ENST00000533361 NDUFB10O96000 172 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 CCNA1P78396 465 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 PTH1RQ03431 593 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 POTEEQ6S8J3 1075 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 LBX2Q6XYB7 198 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 KIAA1211Q6ZU35 1233 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 NBPF11Q86T75 865 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 NUP88Q99567 741 aaPredicted RBP26.31■■□□□ 1.8
SIPA1-208ENST00000533361 IL17RBQ9NRM6 502 aa26.31■■□□□ 1.8
SIPA1-208ENST00000533361 MYH4Q9Y623 1939 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 CNMDO75829 334 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 WDR78Q5VTH9 848 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 SLFN13Q68D06 897 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 ESR2Q92731 530 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 CHMP4CQ96CF2 233 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 ATG4CQ96DT6 458 aa26.3■■□□□ 1.8
SIPA1-208ENST00000533361 BTBD7Q9P203 1132 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms