RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 VWA3AA6NCI4 1184 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 CBFA2T2O43439 604 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 PLCD1P51178 756 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 NLRP5P59047 1200 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 TMED8Q6PL24 325 aaPredicted RBP17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 SLC44A5Q8NCS7 719 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 CCDC112Q8NEF3 446 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 ENOX1Q8TC92 643 aaKnown RBP17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 TGFBRAP1Q8WUH2 860 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 PAGE5Q96GU1 130 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 XDHP47989 1333 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 SLFN14P0C7P3 912 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 GPSM2P81274 684 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 IL17AQ16552 155 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 TRIML1Q8N9V2 468 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 ANKRD7Q92527 254 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 PPP1R13BQ96KQ4 1090 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 KAT14Q9H8E8 782 aa17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 SAMSN1Q9NSI8 373 aaKnown RBP17.5■□□□□ 0.39
CACNA1E-208ENST00000533229 NHSQ6T4R5 1651 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 NCBP1Q09161 790 aaKnown RBP17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 SLC35G1Q2M3R5 365 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 TMX1Q9H3N1 280 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 THSD7AQ9UPZ6 1657 aa17.49■□□□□ 0.39
CACNA1E-208ENST00000533229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 MYO1BO43795 1136 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 GPKOWQ92917 476 aaPredicted RBP eCLIP17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 BMP15O95972 392 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 PPP4CP60510 307 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 STAMQ92783 540 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 GJD4Q96KN9 370 aaPredicted RBP17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 MKNK2Q9HBH9 465 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
CACNA1E-208ENST00000533229 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 KIF5BP33176 963 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 MCM7P33993 719 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 KCNJ6P48051 423 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 DPYDQ12882 1025 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 ZNF804AQ7Z570 1209 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 MAPKAPK5Q8IW41 473 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 ANKS1AQ92625 1134 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 SAP30BPQ9UHR5 308 aaKnown RBP17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 DACH1Q9UI36 760 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 CYTH3O43739 400 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 SMYD4Q8IYR2 804 aaPredicted RBP17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 CD209Q9NNX6 404 aa17.47■□□□□ 0.39
CACNA1E-208ENST00000533229 ROBO3Q96MS0 1386 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 MYH6P13533 1939 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 BAG3O95817 575 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 CDK11BP21127 795 aaKnown RBP17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 TBX2Q13207 712 aaPredicted RBP17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 E2F4Q16254 413 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 C15orf52Q6ZUT6 534 aaKnown RBP17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 RASGRP2Q7LDG7 609 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 TMEM139Q8IV31 216 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 MTRQ99707 1265 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
CACNA1E-208ENST00000533229 LAMB1P07942 1786 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 GYS1P13807 737 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 ERCC5P28715 1186 aaPredicted RBP17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 TRAPPC10P48553 1259 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 GSTO1P78417 241 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 BLIDQ8IZY5 108 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 C4orf32Q8N8J7 132 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 UFL1O94874 794 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 RASA1P20936 1047 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 CDC25AP30304 524 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 STX17P56962 302 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 CUL4BQ13620 913 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 GRM4Q14833 912 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 KIF18AQ8NI77 898 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
CACNA1E-208ENST00000533229 M0R2N6 131 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 BTDP43251 543 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms