RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 CALM1P0DP23 149 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 CALM2P0DP24 149 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 CALM3P0DP25 149 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 IFNAR1P17181 557 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 PTPRAP18433 802 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 METAP2P50579 478 aaKnown RBP eCLIP9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 PPP2R5BQ15173 497 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 RTN1Q16799 776 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 NFXL1Q6ZNB6 911 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 MOB2Q70IA6 237 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 CATIPQ7Z7H3 387 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 SRBD1Q8N5C6 995 aaKnown RBP9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 ZKSCAN4Q969J2 545 aaPredicted RBP9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 SHISA4Q96DD7 197 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 WRNIP1Q96S55 665 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 WDR18Q9BV38 432 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 KAT14Q9H8E8 782 aa9.96□□□□□ -0.82
PMS2P3-208ENST00000533167 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 USP17L5A8MUK1 530 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 UBE2Q2LH0YL09 131 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 NDUFB10O96000 172 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 ZNF543Q08ER8 600 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 VGLL4Q14135 290 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 GMCL1Q96IK5 515 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 KIAA1683Q9H0B3 1180 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 CABP5Q9NP86 173 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 CNTNAP5Q8WYK1 1306 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 STK36Q9NRP7 1315 aa9.95□□□□□ -0.82
PMS2P3-208ENST00000533167 PASKQ96RG2 1323 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 F5H6K3 240 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 SMARCA1P28370 1054 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 KLRC3Q07444 240 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 PKP1Q13835 747 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 RAB3GAP1Q15042 981 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 PKN1Q16512 942 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 CST9Q5W186 159 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 USP17L2Q6R6M4 530 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 ZNF526Q8TF50 670 aaPredicted RBP9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 DCAF4Q8WV16 495 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 MTMR8Q96EF0 704 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 CLMNQ96JQ2 1002 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 C12orf42Q96LP6 360 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 RIOX1Q9H6W3 641 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 VCPKMTQ9H867 229 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 CWC22Q9HCG8 908 aaKnown RBP9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 RBM28Q9NW13 759 aaKnown RBP9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 AFG3L2Q9Y4W6 797 aa9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
PMS2P3-208ENST00000533167 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 UNCXA6NJT0 531 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 DHX16O60231 1041 aaKnown RBP9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 PPFIA3O75145 1194 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 GJB2P29033 226 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 GJA5P36382 358 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 FKBP1BP68106 108 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 MOGSQ13724 837 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 ASPRV1Q53RT3 343 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 SH3D19Q5HYK7 790 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 SLFN13Q68D06 897 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 TTBK2Q6IQ55 1244 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 BTNL9Q6UXG8 535 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 SYNE3Q6ZMZ3 975 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 CNKSR2Q8WXI2 1034 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 PHKBQ93100 1093 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 SPZ1Q9BXG8 430 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 RNF26Q9BY78 433 aaPredicted RBP9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 CPVLQ9H3G5 476 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 CLEC11AQ9Y240 323 aa9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 POLR2AP24928 1970 aaKnown RBP9.93□□□□□ -0.82
PMS2P3-208ENST00000533167 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 BRD1O95696 1058 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 PARP1P09874 1014 aaKnown RBP9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 GOLGA8HP0CJ92 632 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 KIF5BP33176 963 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 IREB2P48200 963 aaKnown RBP9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 HMGN5P82970 282 aaKnown RBP9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 DGKZQ13574 1117 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 PRKG1Q13976 671 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 ZNF280CQ8ND82 737 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 RGS22Q8NE09 1264 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 CTCFLQ8NI51 663 aaPredicted RBP9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 CHMP4CQ96CF2 233 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 DDX11Q96FC9 970 aa9.92□□□□□ -0.82
PMS2P3-208ENST00000533167 AIFM3Q96NN9 605 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms