RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DHX32Q7L7V1 743 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 ANKRD23Q86SG2 305 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 LPAR1Q92633 364 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 MTA3Q9BTC8 594 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 LAMB1P07942 1786 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 TNKSO95271 1327 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 BTBD19C9JJ37 291 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 PDHXO00330 501 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 PRC1O43663 620 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 OSBPP22059 807 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 ANAPC15P60006 121 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 DGKZQ13574 1117 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 RCSD1Q6JBY9 416 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 FAM43AQ8N2R8 423 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 TMTC2Q8N394 836 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 TMEM47Q9BQJ4 181 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 DOCK1Q14185 1865 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 IGF2BP3O00425 579 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 EXOSC10Q01780 885 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 WTAPQ15007 396 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 ENAHQ8N8S7 591 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 IGDCC4Q8TDY8 1250 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 RNF186Q9NXI6 227 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
TRAPPC4-211ENST00000533012 WDR19Q8NEZ3 1342 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 TRPA1O75762 1119 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 NDUFB10O96000 172 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 VCAM1P19320 739 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 ANTXR2P58335 489 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 FGD1P98174 961 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 SEC23AQ15436 765 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 C22orf23Q9BZE7 217 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 RPAP3Q9H6T3 665 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 ZFYVE28Q9HCC9 887 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 WBP1LQ9NX94 342 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
TRAPPC4-211ENST00000533012 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 CA12O43570 354 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 SLC1A4P43007 532 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 CATSPERGQ6ZRH7 1159 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
TRAPPC4-211ENST00000533012 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 SH2B2O14492 632 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 CYP2C8P10632 490 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 BMP3P12645 472 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 LIFRP42702 1097 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 COG2Q14746 738 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms