RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 PROCA1Q8NCQ7 364 aaPredicted RBP14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 MKL1Q969V6 931 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 BEGAINQ9BUH8 593 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 SH2D4AQ9H788 454 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 VCPKMTQ9H867 229 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 AGTPBP1Q9UPW5 1226 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 MTMR7Q9Y216 660 aa14.04□□□□□ -0.16
TRAF3IP2-212ENST00000532708 F5H6K3 240 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 EPB41L2O43491 1005 aaKnown RBP14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TBC1D8O95759 1140 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 VCAM1P19320 739 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 KLRC3Q07444 240 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 KCNB2Q92953 911 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 UBAC1Q9BSL1 405 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 CYP2C8P10632 490 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 NOVP48745 357 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 ANTXR2P58335 489 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 ENAHQ8N8S7 591 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 NEK1Q96PY6 1258 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TMEM47Q9BQJ4 181 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 R3HDMLQ9H3Y0 253 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 LOC285556D6RIA3 1793 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TNKSO95271 1327 aa14.03□□□□□ -0.16
TRAF3IP2-212ENST00000532708 CPA1P15085 419 aa14.02□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.16
TRAF3IP2-212ENST00000532708 TTC14Q96N46 770 aa14.02□□□□□ -0.16
TRAF3IP2-212ENST00000532708 NUP88Q99567 741 aaPredicted RBP14.02□□□□□ -0.16
TRAF3IP2-212ENST00000532708 RPAP3Q9H6T3 665 aaPredicted RBP14.02□□□□□ -0.16
TRAF3IP2-212ENST00000532708 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PRC1O43663 620 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 NDUFB10O96000 172 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 MCCP23508 829 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 NT5C2P49902 561 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CRHR2Q13324 411 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 KRT32Q14532 448 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PPP4R3BQ5MIZ7 849 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TCEANC2Q96MN5 208 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 JAKMIP1Q96N16 626 aaKnown RBP14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 LRRC2Q9BYS8 371 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ALDH1A1P00352 501 aa14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 MCM5P33992 734 aa14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SEC23AQ15436 765 aa14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 DGKHQ86XP1 1220 aa14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 LPAR1Q92633 364 aa14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ASCC2Q9H1I8 757 aaPredicted RBP14.01□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CA12O43570 354 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 EIF5BO60841 1220 aaKnown RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 HOXA7P31268 230 aaPredicted RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TMEM67Q5HYA8 995 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 IFIT1BQ5T764 474 aaKnown RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SLFN13Q68D06 897 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 GMCL1P1Q8NEA9 526 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TANGO6Q9C0B7 1094 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ERICH2A1L162 156 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L15C9J2P7 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L13C9JLJ4 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L11C9JVI0 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L18D6R9N7 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L22D6RA61 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L17D6RBQ6 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L19D6RCP7 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L20D6RJB6 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 FOXN1O15353 648 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 OSBPP22059 807 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 IRX3P78415 501 aaPredicted RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 USP17L24Q0WX57 530 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PABPC4Q13310 644 aaKnown RBP eCLIP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CATSPERGQ6ZRH7 1159 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ANKS1AQ92625 1134 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 P2RX7Q99572 595 aaKnown RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 KAT14Q9H8E8 782 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ZFYVE28Q9HCC9 887 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SLC45A1Q9Y2W3 748 aa14□□□□□ -0.17
TRAF3IP2-212ENST00000532708 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CASTP20810 708 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 EXOSC10Q01780 885 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 WTAPQ15007 396 aa13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 DHX32Q7L7V1 743 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PNMA1Q8ND90 353 aa13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SYNPO2Q9UMS6 1093 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms